Analysis of interatomic Contacts of Structural Units in PDB entry:
9BHW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BHW entry

There are 4 chains in PDB entry 9BHW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 36SER 304
B
 THR 2LYS 300
C
 THR 2LEU 298
D
 GLY 36LEU 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 9BHW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 60Right-handed alpha
Helix 2
AA2
A
115 134Right-handed alpha
Helix 3
AA3
A
161 171Right-handed alpha
Helix 4
AA4
A
183 187Right-handed 310
Helix 5
AA5
A
188 206Right-handed alpha
Helix 6
AA6
A
226 230Right-handed alpha
Helix 7
AA7
A
269 279Right-handed alpha
Helix 8
AA8
A
281 292Right-handed alpha
Helix 9
AA9
A
292 302Right-handed alpha
Helix 10
AB1
B
10 12Right-handed 310
Helix 11
AB2
B
13 26Right-handed alpha
Helix 12
AB3
B
40 50Right-handed alpha
Helix 13
AB4
B
104 124Right-handed alpha
Helix 14
AB5
B
151 162Right-handed alpha
Helix 15
AB6
B
173 177Right-handed 310
Helix 16
AB7
B
178 196Right-handed alpha
Helix 17
AB8
B
203 207Right-handed 310
Helix 18
AB9
B
212 225Right-handed alpha
Helix 19
AC1
B
262 272Right-handed alpha
Helix 20
AC2
B
274 285Right-handed alpha
Helix 21
AC3
B
285 296Right-handed alpha
Helix 22
AC4
C
10 12Right-handed 310
Helix 23
AC5
C
13 24Right-handed alpha
Helix 24
AC6
C
40 50Right-handed alpha
Helix 25
AC7
C
104 124Right-handed alpha
Helix 26
AC8
C
151 162Right-handed alpha
Helix 27
AC9
C
173 177Right-handed 310
Helix 28
AD1
C
178 196Right-handed alpha
Helix 29
AD2
C
203 207Right-handed 310
Helix 30
AD3
C
212 225Right-handed alpha
Helix 31
AD4
C
262 272Right-handed alpha
Helix 32
AD5
C
274 285Right-handed alpha
Helix 33
AD6
C
285 298Right-handed alpha
Helix 34
AD7
D
50 59Right-handed alpha
Helix 35
AD8
D
89 93Right-handed 310
Helix 36
AD9
D
115 133Right-handed alpha
Helix 37
AE1
D
161 172Right-handed alpha
Helix 38
AE2
D
183 187Right-handed 310
Helix 39
AE3
D
188 206Right-handed alpha
Helix 40
AE4
D
228 232Right-handed 310
Helix 41
AE5
D
269 278Right-handed alpha
Helix 42
AE6
D
282 292Right-handed alpha
Helix 43
AE7
D
292 302Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 9BHW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 89first strand
Strand 2
A
94 101anti-parallel
Strand 3
A
37 44parallel
Strand 4
A
148 153parallel
Strand 5
A
176 181parallel
Strand 6
A
234 235parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 245first strand
Strand 2
A
248 255anti-parallel
Strand 3
A
258 261anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 79first strand
Strand 2
B
82 90anti-parallel
Strand 3
B
27 34parallel
Strand 4
B
138 143parallel
Strand 5
B
167 171parallel
Strand 6
B
227 228parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 238first strand
Strand 2
B
241 248anti-parallel
Strand 3
B
251 254anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 79first strand
Strand 2
C
82 90anti-parallel
Strand 3
C
27 34parallel
Strand 4
C
138 143parallel
Strand 5
C
167 171parallel
Strand 6
C
227 228parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 238first strand
Strand 2
C
241 247anti-parallel
Strand 3
C
252 254anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 88first strand
Strand 2
D
95 101anti-parallel
Strand 3
D
37 44parallel
Strand 4
D
148 153parallel
Strand 5
D
176 181parallel
Strand 6
D
234 235parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
242 245first strand
Strand 2
D
248 255anti-parallel
Strand 3
D
258 261anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il