Analysis of interatomic Contacts of Structural Units in PDB entry:
9BHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BHX entry

There is 1 chain in PDB entry 9BHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 215PRO 1289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 9BHX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
216 228Right-handed alpha
Helix 2
AA2
A
248 267Right-handed alpha
Helix 3
AA3
A
269 274Right-handed alpha
Helix 4
AA4
A
283 309Right-handed alpha
Helix 5
AA5
A
815 819Right-handed 310
Helix 6
AA6
A
1066 1070Right-handed 310
Helix 7
AA7
A
1202 1206Right-handed 310
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There are 20 sheets in PDB entry 9BHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
380 381first strand
Strand 2
A
348 353anti-parallel
Strand 3
A
404 411anti-parallel
Strand 4
A
421 422anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
380 381first strand
Strand 2
A
348 353anti-parallel
Strand 3
A
404 411anti-parallel
Strand 4
A
429 430anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
442 445first strand
Strand 2
A
455 459anti-parallel
Strand 3
A
494 496anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
483 489first strand
Strand 2
A
468 477anti-parallel
Strand 3
A
505 514anti-parallel
Strand 4
A
521 527anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
554 556first strand
Strand 2
A
543 547anti-parallel
Strand 3
A
810 814anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
573 575first strand
Strand 2
A
586 589anti-parallel
Strand 3
A
594 596anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
627 631first strand
Strand 2
A
636 642anti-parallel
Strand 3
A
651 656anti-parallel
Strand 4
A
665 670anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
676 680first strand
Strand 2
A
685 689anti-parallel
Strand 3
A
696 697anti-parallel
Strand 4
A
704 705anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
770 772first strand
Strand 2
A
775 780anti-parallel
Strand 3
A
783 787anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
829 835first strand
Strand 2
A
839 845anti-parallel
Strand 3
A
885 889anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
876 881first strand
Strand 2
A
862 867anti-parallel
Strand 3
A
899 904anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
949 950first strand
Strand 2
A
938 941anti-parallel
Strand 3
A
928 933anti-parallel
Strand 4
A
1178 1184anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
963 964first strand
Strand 2
A
969 973anti-parallel
Strand 3
A
978 983anti-parallel
Strand 4
A
997 998anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1000 1006first strand
Strand 2
A
1011 1016anti-parallel
Strand 3
A
1021 1025anti-parallel
Strand 4
A
1032 1035anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1042 1045first strand
Strand 2
A
1052 1055anti-parallel
Strand 3
A
1059 1063anti-parallel
Strand 4
A
1071 1075anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1082 1089first strand
Strand 2
A
1094 1100anti-parallel
Strand 3
A
1105 1107anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1082 1089first strand
Strand 2
A
1094 1100anti-parallel
Strand 3
A
1110 1111anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1137 1139first strand
Strand 2
A
1144 1148anti-parallel
Strand 3
A
1154 1159anti-parallel
Strand 4
A
1166 1170anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1207 1208first strand
Strand 2
A
1215 1219anti-parallel
Strand 3
A
1252 1256anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1242 1248first strand
Strand 2
A
1231 1239anti-parallel
Strand 3
A
1264 1273anti-parallel
Strand 4
A
1281 1286anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il