Analysis of interatomic Contacts of Structural Units in PDB entry:
9BI0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BI0 entry

There is 1 chain in PDB entry 9BI0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 40ARG 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9BI0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 49Right-handed alpha
Helix 2
AA2
A
88 97Right-handed 310
Helix 3
AA3
A
101 111Right-handed alpha
Helix 4
AA4
A
166 170Right-handed 310
Helix 5
AA5
A
193 203Right-handed alpha
Helix 6
AA6
A
203 215Right-handed alpha
Helix 7
AA7
A
268 273Right-handed alpha
Helix 8
AA8
A
279 303Right-handed alpha
Helix 9
AA9
A
326 336Right-handed alpha
Helix 10
AB1
A
346 361Right-handed alpha
Helix 11
AB2
A
453 455Right-handed 310
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There are 7 sheets in PDB entry 9BI0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
410 414parallel
Strand 3
A
438 451anti-parallel
Strand 4
A
258 267anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
410 414parallel
Strand 3
A
438 451anti-parallel
Strand 4
A
426 433anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
253 256anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
82 85anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 117first strand
Strand 2
A
186 192anti-parallel
Strand 3
A
132 136anti-parallel
Strand 4
A
163 164anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
179 182anti-parallel
Strand 3
A
141 144anti-parallel
Strand 4
A
154 158anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
457 464parallel
Strand 3
A
395 401anti-parallel
Strand 4
A
342 345anti-parallel
Strand 5
A
380 384parallel
Strand 6
A
372 377anti-parallel
Strand 7
A
366 369anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il