Analysis of interatomic Contacts of Structural Units in PDB entry:
9BIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BIM entry

There is 1 chain in PDB entry 9BIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9BIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 29Right-handed alpha
Helix 2
AA2
A
39 44Right-handed alpha
Helix 3
AA3
A
51 63Right-handed alpha
Helix 4
AA4
A
64 77Right-handed alpha
Helix 5
AA5
A
81 85Right-handed 310
Helix 6
AA6
A
86 102Right-handed alpha
Helix 7
AA7
A
102 109Right-handed alpha
Helix 8
AA8
A
115 157Right-handed alpha
Helix 9
AA9
A
160 179Right-handed alpha
Helix 10
AB1
A
187 208Right-handed alpha
Helix 11
AB2
A
214 221Right-handed alpha
Helix 12
AB3
A
236 250Right-handed alpha
Helix 13
AB4
A
254 263Right-handed alpha
Helix 14
AB5
A
267 298Right-handed alpha
Helix 15
AB6
A
319 327Right-handed alpha
Helix 16
AB7
A
329 360Right-handed alpha
Helix 17
AB8
A
373 399Right-handed alpha
Helix 18
AB9
A
401 426Right-handed alpha
Helix 19
AC1
A
431 450Right-handed alpha
Helix 20
AC2
A
478 505Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9BIM.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 467first strand
Strand 2
A
473 474anti-parallel
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