Analysis of interatomic Contacts of Structural Units in PDB entry:
9BIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BIX entry

There is 1 chain in PDB entry 9BIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 44HIS 471
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 9BIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 53Right-handed alpha
Helix 2
AA2
A
272 278Right-handed alpha
Helix 3
AA3
A
283 307Right-handed alpha
Helix 4
AA4
A
317 319Right-handed 310
Helix 5
AA5
A
330 338Right-handed alpha
Helix 6
AA6
A
350 364Right-handed alpha
Helix 7
AA7
A
457 459Right-handed 310
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There are 4 sheets in PDB entry 9BIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
414 418parallel
Strand 3
A
442 455anti-parallel
Strand 4
A
262 271anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
414 418parallel
Strand 3
A
442 455anti-parallel
Strand 4
A
430 437anti-parallel
Strand 5
A
425 427anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 65first strand
Strand 2
A
257 260anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 322first strand
Strand 2
A
461 468parallel
Strand 3
A
399 405anti-parallel
Strand 4
A
346 349anti-parallel
Strand 5
A
384 388parallel
Strand 6
A
376 381anti-parallel
Strand 7
A
371 373anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il