Analysis of interatomic Contacts of Structural Units in PDB entry:
9BJ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BJ7 entry

There are 9 chains in PDB entry 9BJ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 25	ASN 199
B	SER 27	ASN 199
C	SER 24	ASN 199
D	SER 27	ASN 199
E	SER 24	ASN 199
F	LYS 26	ASN 199
G	LEU 25	ASN 199
H	SER 27	ASN 199
I	SER 24	SER 39

There are198 helices in PDB entry 9BJ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	51	Right-handed alpha
Helix 2	AA2	A	53	74	Right-handed alpha
Helix 3	AA3	A	90	101	Right-handed alpha
Helix 4	AA4	A	109	129	Right-handed alpha
Helix 5	AA5	A	130	139	Right-handed alpha
Helix 6	AA6	A	151	156	Right-handed alpha
Helix 7	AA7	A	157	176	Right-handed alpha
Helix 8	AA8	A	181	199	Right-handed alpha
Helix 9	AA9	B	28	50	Right-handed alpha
Helix 10	AB1	B	53	74	Right-handed alpha
Helix 11	AB2	B	109	116	Right-handed alpha
Helix 12	AB3	B	116	129	Right-handed alpha
Helix 13	AB4	B	130	139	Right-handed alpha
Helix 14	AB5	B	151	155	Right-handed 310
Helix 15	AB6	B	157	177	Right-handed alpha
Helix 16	AB7	B	181	199	Right-handed alpha
Helix 17	AB8	C	27	51	Right-handed alpha
Helix 18	AB9	C	53	74	Right-handed alpha
Helix 19	AC1	C	90	101	Right-handed alpha
Helix 20	AC2	C	109	116	Right-handed alpha
Helix 21	AC3	C	116	129	Right-handed alpha
Helix 22	AC4	C	130	138	Right-handed alpha
Helix 23	AC5	C	151	156	Right-handed alpha
Helix 24	AC6	C	157	177	Right-handed alpha
Helix 25	AC7	C	181	199	Right-handed alpha
Helix 26	AC8	D	28	51	Right-handed alpha
Helix 27	AC9	D	53	74	Right-handed alpha
Helix 28	AD1	D	109	116	Right-handed alpha
Helix 29	AD2	D	116	129	Right-handed alpha
Helix 30	AD3	D	130	141	Right-handed alpha
Helix 31	AD4	D	151	155	Right-handed 310
Helix 32	AD5	D	157	176	Right-handed alpha
Helix 33	AD6	D	181	199	Right-handed alpha
Helix 34	AD7	E	27	51	Right-handed alpha
Helix 35	AD8	E	53	71	Right-handed alpha
Helix 36	AD9	E	72	77	Right-handed alpha
Helix 37	AE1	E	98	102	Right-handed 310
Helix 38	AE2	E	109	116	Right-handed alpha
Helix 39	AE3	E	116	129	Right-handed alpha
Helix 40	AE4	E	130	139	Right-handed alpha
Helix 41	AE5	E	151	155	Right-handed 310
Helix 42	AE6	E	157	177	Right-handed alpha
Helix 43	AE7	E	181	199	Right-handed alpha
Helix 44	AE8	F	27	51	Right-handed alpha
Helix 45	AE9	F	53	74	Right-handed alpha
Helix 46	AF1	F	109	116	Right-handed alpha
Helix 47	AF2	F	116	129	Right-handed alpha
Helix 48	AF3	F	130	139	Right-handed alpha
Helix 49	AF4	F	151	155	Right-handed 310
Helix 50	AF5	F	157	176	Right-handed alpha
Helix 51	AF6	F	180	199	Right-handed alpha
Helix 52	AF7	G	27	51	Right-handed alpha
Helix 53	AF8	G	53	71	Right-handed alpha
Helix 54	AF9	G	90	100	Right-handed alpha
Helix 55	AG1	G	109	116	Right-handed alpha
Helix 56	AG2	G	116	130	Right-handed alpha
Helix 57	AG3	G	130	141	Right-handed alpha
Helix 58	AG4	G	151	155	Right-handed 310
Helix 59	AG5	G	157	177	Right-handed alpha
Helix 60	AG6	G	181	199	Right-handed alpha
Helix 61	AG7	H	28	51	Right-handed alpha
Helix 62	AG8	H	53	73	Right-handed alpha
Helix 63	AG9	H	109	130	Right-handed alpha
Helix 64	AH1	H	130	139	Right-handed alpha
Helix 65	AH2	H	151	155	Right-handed 310
Helix 66	AH3	H	157	176	Right-handed alpha
Helix 67	AH4	H	181	199	Right-handed alpha
Helix 68	AH5	I	27	51	Right-handed alpha
Helix 69	AH6	I	53	71	Right-handed alpha
Helix 70	AH7	I	97	101	Right-handed 310
Helix 71	AH8	I	109	129	Right-handed alpha
Helix 72	AH9	I	130	141	Right-handed alpha
Helix 73	AI1	I	151	156	Right-handed alpha
Helix 74	AI2	I	157	176	Right-handed alpha
Helix 75	AI3	I	181	199	Right-handed alpha
Helix 76	AI4	J	28	50	Right-handed alpha
Helix 77	AI5	J	53	74	Right-handed alpha
Helix 78	AI6	J	109	116	Right-handed alpha
Helix 79	AI7	J	116	129	Right-handed alpha
Helix 80	AI8	J	130	139	Right-handed alpha
Helix 81	AI9	J	151	155	Right-handed 310
Helix 82	AJ1	J	157	177	Right-handed alpha
Helix 83	AJ2	J	181	199	Right-handed alpha
Helix 84	AJ3	K	27	51	Right-handed alpha
Helix 85	AJ4	K	53	71	Right-handed alpha
Helix 86	AJ5	K	109	130	Right-handed alpha
Helix 87	AJ6	K	130	141	Right-handed alpha
Helix 88	AJ7	K	151	155	Right-handed 310
Helix 89	AJ8	K	157	176	Right-handed alpha
Helix 90	AJ9	K	181	199	Right-handed alpha
Helix 91	AK1	L	28	50	Right-handed alpha
Helix 92	AK2	L	53	74	Right-handed alpha
Helix 93	AK3	L	97	101	Right-handed 310
Helix 94	AK4	L	109	116	Right-handed alpha
Helix 95	AK5	L	116	129	Right-handed alpha
Helix 96	AK6	L	130	139	Right-handed alpha
Helix 97	AK7	L	151	155	Right-handed 310
Helix 98	AK8	L	157	177	Right-handed alpha
Helix 99	AK9	L	180	199	Right-handed alpha
Helix 100	AL1	M	27	51	Right-handed alpha
Helix 101	AL2	M	53	71	Right-handed alpha
Helix 102	AL3	M	109	129	Right-handed alpha
Helix 103	AL4	M	130	141	Right-handed alpha
Helix 104	AL5	M	151	156	Right-handed alpha
Helix 105	AL6	M	157	177	Right-handed alpha
Helix 106	AL7	M	182	199	Right-handed alpha
Helix 107	AL8	N	28	51	Right-handed alpha
Helix 108	AL9	N	53	74	Right-handed alpha
Helix 109	AM1	N	97	101	Right-handed 310
Helix 110	AM2	N	109	116	Right-handed alpha
Helix 111	AM3	N	116	130	Right-handed alpha
Helix 112	AM4	N	130	139	Right-handed alpha
Helix 113	AM5	N	151	155	Right-handed 310
Helix 114	AM6	N	157	176	Right-handed alpha
Helix 115	AM7	N	181	199	Right-handed alpha
Helix 116	AM8	O	27	51	Right-handed alpha
Helix 117	AM9	O	53	71	Right-handed alpha
Helix 118	AN1	O	109	130	Right-handed alpha
Helix 119	AN2	O	130	141	Right-handed alpha
Helix 120	AN3	O	151	155	Right-handed 310
Helix 121	AN4	O	157	176	Right-handed alpha
Helix 122	AN5	O	181	199	Right-handed alpha
Helix 123	AN6	P	28	51	Right-handed alpha
Helix 124	AN7	P	53	74	Right-handed alpha
Helix 125	AN8	P	111	130	Right-handed alpha
Helix 126	AN9	P	130	139	Right-handed alpha
Helix 127	AO1	P	151	155	Right-handed 310
Helix 128	AO2	P	157	177	Right-handed alpha
Helix 129	AO3	P	180	199	Right-handed alpha
Helix 130	AO4	Q	27	51	Right-handed alpha
Helix 131	AO5	Q	53	71	Right-handed alpha
Helix 132	AO6	Q	72	77	Right-handed alpha
Helix 133	AO7	Q	96	101	Right-handed alpha
Helix 134	AO8	Q	109	116	Right-handed alpha
Helix 135	AO9	Q	116	129	Right-handed alpha
Helix 136	AP1	Q	130	138	Right-handed alpha
Helix 137	AP2	Q	151	156	Right-handed alpha
Helix 138	AP3	Q	157	177	Right-handed alpha
Helix 139	AP4	Q	181	198	Right-handed alpha
Helix 140	AP5	R	27	51	Right-handed alpha
Helix 141	AP6	R	53	74	Right-handed alpha
Helix 142	AP7	R	110	116	Right-handed alpha
Helix 143	AP8	R	116	129	Right-handed alpha
Helix 144	AP9	R	130	139	Right-handed alpha
Helix 145	AQ1	R	151	155	Right-handed 310
Helix 146	AQ2	R	157	176	Right-handed alpha
Helix 147	AQ3	R	181	199	Right-handed alpha
Helix 148	AQ4	S	27	51	Right-handed alpha
Helix 149	AQ5	S	53	71	Right-handed alpha
Helix 150	AQ6	S	72	77	Right-handed alpha
Helix 151	AQ7	S	96	101	Right-handed alpha
Helix 152	AQ8	S	111	116	Right-handed alpha
Helix 153	AQ9	S	116	129	Right-handed alpha
Helix 154	AR1	S	130	139	Right-handed alpha
Helix 155	AR2	S	151	155	Right-handed 310
Helix 156	AR3	S	157	177	Right-handed alpha
Helix 157	AR4	S	181	198	Right-handed alpha
Helix 158	AR5	T	27	51	Right-handed alpha
Helix 159	AR6	T	53	74	Right-handed alpha
Helix 160	AR7	T	111	116	Right-handed alpha
Helix 161	AR8	T	116	129	Right-handed alpha
Helix 162	AR9	T	130	141	Right-handed alpha
Helix 163	AS1	T	151	155	Right-handed 310
Helix 164	AS2	T	157	176	Right-handed alpha
Helix 165	AS3	T	180	199	Right-handed alpha
Helix 166	AS4	U	27	51	Right-handed alpha
Helix 167	AS5	U	53	71	Right-handed alpha
Helix 168	AS6	U	97	101	Right-handed 310
Helix 169	AS7	U	109	116	Right-handed alpha
Helix 170	AS8	U	116	129	Right-handed alpha
Helix 171	AS9	U	130	141	Right-handed alpha
Helix 172	AT1	U	151	156	Right-handed alpha
Helix 173	AT2	U	157	176	Right-handed alpha
Helix 174	AT3	U	182	199	Right-handed alpha
Helix 175	AT4	V	28	51	Right-handed alpha
Helix 176	AT5	V	53	74	Right-handed alpha
Helix 177	AT6	V	109	116	Right-handed alpha
Helix 178	AT7	V	116	130	Right-handed alpha
Helix 179	AT8	V	130	139	Right-handed alpha
Helix 180	AT9	V	151	156	Right-handed alpha
Helix 181	AU1	V	157	176	Right-handed alpha
Helix 182	AU2	V	181	199	Right-handed alpha
Helix 183	AU3	W	27	51	Right-handed alpha
Helix 184	AU4	W	53	71	Right-handed alpha
Helix 185	AU5	W	109	116	Right-handed alpha
Helix 186	AU6	W	116	129	Right-handed alpha
Helix 187	AU7	W	130	141	Right-handed alpha
Helix 188	AU8	W	151	156	Right-handed alpha
Helix 189	AU9	W	157	176	Right-handed alpha
Helix 190	AV1	W	181	199	Right-handed alpha
Helix 191	AV2	X	28	51	Right-handed alpha
Helix 192	AV3	X	53	74	Right-handed alpha
Helix 193	AV4	X	109	116	Right-handed alpha
Helix 194	AV5	X	116	130	Right-handed alpha
Helix 195	AV6	X	130	141	Right-handed alpha
Helix 196	AV7	X	151	155	Right-handed 310
Helix 197	AV8	X	157	176	Right-handed alpha
Helix 198	AV9	X	181	199	Right-handed alpha

There are 26 sheets in PDB entry 9BJ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	148	150	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	145	first strand
Strand 2	B	148	150	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	148	150	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	145	first strand
Strand 2	D	148	150	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	145	first strand
Strand 2	E	148	150	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	143	145	first strand
Strand 2	F	148	150	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	143	145	first strand
Strand 2	G	148	150	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	143	145	first strand
Strand 2	H	148	150	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	145	first strand
Strand 2	I	148	150	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	143	144	first strand
Strand 2	J	149	150	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	75	76	first strand
Strand 2	K	81	82	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	143	145	first strand
Strand 2	K	148	150	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	143	145	first strand
Strand 2	L	148	150	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	75	76	first strand
Strand 2	M	81	82	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	143	145	first strand
Strand 2	M	148	150	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	143	145	first strand
Strand 2	N	148	150	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	143	145	first strand
Strand 2	O	148	150	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	143	145	first strand
Strand 2	P	148	150	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	143	145	first strand
Strand 2	Q	148	150	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	143	145	first strand
Strand 2	R	148	150	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	143	145	first strand
Strand 2	S	148	150	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	143	145	first strand
Strand 2	T	148	150	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	143	145	first strand
Strand 2	U	148	150	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	143	145	first strand
Strand 2	V	148	150	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	143	145	first strand
Strand 2	W	148	150	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	143	145	first strand
Strand 2	X	148	150	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BJ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BJ7