Analysis of interatomic Contacts of Structural Units in PDB entry:
9BLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BLU entry

There are 3 chains in PDB entry 9BLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 46GLU 559
B
 THR 59ALA 219
C
 THR 59ALA 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9BLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
102 107Right-handed alpha
Helix 2
AA2
A
108 110Right-handed 310
Helix 3
AA3
A
120 124Right-handed 310
Helix 4
AA4
A
130 140Right-handed alpha
Helix 5
AA5
A
162 183Right-handed alpha
Helix 6
AA6
A
198 212Right-handed alpha
Helix 7
AA7
A
222 231Right-handed alpha
Helix 8
AA8
A
257 261Right-handed 310
Helix 9
AA9
A
274 294Right-handed alpha
Helix 10
AB1
A
302 319Right-handed alpha
Helix 11
AB2
A
348 355Right-handed alpha
Helix 12
AB3
A
355 361Right-handed alpha
Helix 13
AB4
A
363 373Right-handed alpha
Helix 14
AB5
A
392 404Right-handed alpha
Helix 15
AB6
A
412 414Right-handed 310
Helix 16
AB7
A
415 429Right-handed alpha
Helix 17
AB8
A
432 437Right-handed alpha
Helix 18
AB9
B
60 102Right-handed alpha
Helix 19
AC1
B
104 125Right-handed alpha
Helix 20
AC2
B
134 158Right-handed alpha
Helix 21
AC3
C
60 125Right-handed alpha
Helix 22
AC4
C
134 158Right-handed alpha
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There are 12 sheets in PDB entry 9BLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 77first strand
Strand 2
A
64 71anti-parallel
Strand 3
A
87 88anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 77first strand
Strand 2
A
64 71anti-parallel
Strand 3
A
55 59anti-parallel
Strand 4
A
188 193parallel
Strand 5
A
215 221parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
90 92anti-parallel
Strand 3
A
117 118anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
152 156anti-parallel
Strand 3
A
159 161anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 270first strand
Strand 2
A
250 254anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
382 386parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 335first strand
Strand 2
A
338 347anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 447first strand
Strand 2
A
481 488anti-parallel
Strand 3
A
501 506anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 473first strand
Strand 2
A
517 522anti-parallel
Strand 3
A
532 536anti-parallel
Strand 4
A
544 545anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 179first strand
Strand 2
B
209 213parallel
Strand 3
B
191 196anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 201first strand
Strand 2
B
204 207anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 163first strand
Strand 2
C
198 201anti-parallel
Strand 3
C
204 207anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 180first strand
Strand 2
C
209 213parallel
Strand 3
C
191 194anti-parallel
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