Analysis of interatomic Contacts of Structural Units in PDB entry:
9BQ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BQ2 entry

There are 2 chains in PDB entry 9BQ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 402
B
 MET 1LYS 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9BQ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 92Right-handed alpha
Helix 2
AA2
A
95 117Right-handed alpha
Helix 3
AA3
A
119 126Right-handed alpha
Helix 4
AA4
A
126 144Right-handed alpha
Helix 5
AA5
A
162 167Right-handed alpha
Helix 6
AA6
A
168 286Right-handed alpha
Helix 7
AA7
A
286 349Right-handed alpha
Helix 8
AA8
A
352 373Right-handed alpha
Helix 9
AA9
A
374 376Right-handed 310
Helix 10
AB1
B
77 89Right-handed alpha
Helix 11
AB2
B
92 114Right-handed alpha
Helix 12
AB3
B
116 123Right-handed alpha
Helix 13
AB4
B
123 142Right-handed alpha
Helix 14
AB5
B
159 164Right-handed alpha
Helix 15
AB6
B
165 283Right-handed alpha
Helix 16
AB7
B
283 346Right-handed alpha
Helix 17
AB8
B
349 373Right-handed alpha
Helix 18
AB9
B
389 409Right-handed alpha
Helix 19
AC1
B
410 412Right-handed 310
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There are 6 sheets in PDB entry 9BQ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 36first strand
Strand 2
A
2 18anti-parallel
Strand 3
A
41 46anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 56first strand
Strand 2
A
68 77anti-parallel
Strand 3
A
147 158anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 383first strand
Strand 2
B
378 382parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
28 30anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 25first strand
Strand 2
B
9 15anti-parallel
Strand 3
B
36 42anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 52first strand
Strand 2
B
64 73anti-parallel
Strand 3
B
144 155anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il