Analysis of interatomic Contacts of Structural Units in PDB entry:
9BR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BR6 entry

There are 2 chains in PDB entry 9BR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 35HIS 438
B
 ASP 34HIS 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9BR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 65Right-handed alpha
Helix 2
AA2
A
79 84Right-handed 310
Helix 3
AA3
A
94 100Right-handed alpha
Helix 4
AA4
A
112 126Right-handed alpha
Helix 5
AA5
A
136 141Right-handed alpha
Helix 6
AA6
A
144 152Right-handed alpha
Helix 7
AA7
A
175 183Right-handed alpha
Helix 8
AA8
A
202 227Right-handed alpha
Helix 9
AA9
A
236 255Right-handed alpha
Helix 10
AB1
A
287 298Right-handed alpha
Helix 11
AB2
A
301 306Right-handed alpha
Helix 12
AB3
A
307 310Right-handed 310
Helix 13
AB4
A
311 318Right-handed alpha
Helix 14
AB5
A
318 332Right-handed alpha
Helix 15
AB6
A
334 342Right-handed alpha
Helix 16
AB7
A
354 361Right-handed alpha
Helix 17
AB8
A
361 367Right-handed alpha
Helix 18
AB9
A
407 415Right-handed alpha
Helix 19
AC1
A
419 430Right-handed alpha
Helix 20
AC2
B
53 65Right-handed alpha
Helix 21
AC3
B
79 84Right-handed 310
Helix 22
AC4
B
94 100Right-handed alpha
Helix 23
AC5
B
112 126Right-handed alpha
Helix 24
AC6
B
136 141Right-handed alpha
Helix 25
AC7
B
144 152Right-handed alpha
Helix 26
AC8
B
175 183Right-handed alpha
Helix 27
AC9
B
202 227Right-handed alpha
Helix 28
AD1
B
236 255Right-handed alpha
Helix 29
AD2
B
287 298Right-handed alpha
Helix 30
AD3
B
301 306Right-handed alpha
Helix 31
AD4
B
307 310Right-handed 310
Helix 32
AD5
B
311 318Right-handed alpha
Helix 33
AD6
B
318 333Right-handed alpha
Helix 34
AD7
B
334 342Right-handed alpha
Helix 35
AD8
B
354 361Right-handed alpha
Helix 36
AD9
B
361 367Right-handed alpha
Helix 37
AE1
B
407 415Right-handed alpha
Helix 38
AE2
B
419 430Right-handed alpha
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There are 8 sheets in PDB entry 9BR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 433first strand
Strand 2
A
104 108anti-parallel
Strand 3
A
68 73parallel
Strand 4
A
45 48parallel
Strand 5
A
128 131parallel
Strand 6
A
156 161parallel
Strand 7
A
231 235parallel
Strand 8
B
389 390anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
92 93anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 275first strand
Strand 2
A
280 284anti-parallel
Strand 3
A
349 351anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 375first strand
Strand 2
A
379 384anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 390first strand
Strand 2
B
231 235anti-parallel
Strand 3
B
156 161parallel
Strand 4
B
128 131parallel
Strand 5
B
45 48parallel
Strand 6
B
68 73parallel
Strand 7
B
104 108parallel
Strand 8
B
432 433anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
92 93anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 275first strand
Strand 2
B
280 284anti-parallel
Strand 3
B
349 351anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
370 375first strand
Strand 2
B
379 384anti-parallel
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