Analysis of interatomic Contacts of Structural Units in PDB entry:
9BS0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BS0 entry

There are 25 chains in PDB entry 9BS0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	U 3	C 2925
B	U 3	A 114
C	ALA 2	ASN 276
D	THR 2	SER 208
E	PRO 2	LEU 206
F	VAL 4	GLY 83
G	ARG 2	GLY 145
H	ILE 2	ILE 122
I	MET 1	ILE 146
J	SER 2	VAL 120
K	GLN 5	ILE 116
L	PRO 2	ASN 118
M	TYR 2	ALA 102
N	GLN 2	LYS 110
O	LYS 2	ILE 92
P	HIS 2	LEU 101
Q	ALA 31	VAL 92
R	MET 1	ASN 65
S	ALA 2	GLN 59
T	VAL 3	ILE 54
U	MET 1	ALA 44
V	LYS 7	PHE 120
W	LYS 3	LYS 436
Z	ARG 2	THR 48
Y	SER 18	VAL 214

There are 80 helices in PDB entry 9BS0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	133	135	Right-handed 310
Helix 2	AA2	C	177	179	Right-handed 310
Helix 3	AA3	C	197	203	Right-handed 310
Helix 4	AA4	C	207	214	Right-handed alpha
Helix 5	AA5	C	264	268	Right-handed 310
Helix 6	AA6	D	40	45	Right-handed alpha
Helix 7	AA7	D	62	69	Right-handed alpha
Helix 8	AA8	D	98	102	Right-handed 310
Helix 9	AA9	D	121	126	Right-handed alpha
Helix 10	AB1	E	8	12	Right-handed 310
Helix 11	AB2	E	20	25	Right-handed alpha
Helix 12	AB3	E	29	43	Right-handed alpha
Helix 13	AB4	E	102	120	Right-handed alpha
Helix 14	AB5	E	135	146	Right-handed alpha
Helix 15	AB6	E	160	167	Right-handed alpha
Helix 16	AB7	E	182	189	Right-handed alpha
Helix 17	AB8	E	196	206	Right-handed alpha
Helix 18	AB9	F	59	82	Right-handed alpha
Helix 19	AC1	G	8	12	Right-handed 310
Helix 20	AC2	G	25	39	Right-handed alpha
Helix 21	AC3	G	68	72	Right-handed 310
Helix 22	AC4	G	90	96	Right-handed alpha
Helix 23	AC5	G	99	109	Right-handed alpha
Helix 24	AC6	G	113	120	Right-handed alpha
Helix 25	AC7	H	105	108	Right-handed 310
Helix 26	AC8	H	111	118	Right-handed alpha
Helix 27	AC9	I	78	83	Right-handed alpha
Helix 28	AD1	I	92	100	Right-handed alpha
Helix 29	AD2	I	133	137	Right-handed alpha
Helix 30	AD3	J	9	28	Right-handed alpha
Helix 31	AD4	J	34	51	Right-handed alpha
Helix 32	AD5	J	55	64	Right-handed alpha
Helix 33	AD6	J	78	91	Right-handed alpha
Helix 34	AD7	K	6	13	Right-handed alpha
Helix 35	AD8	K	14	16	Right-handed 310
Helix 36	AD9	K	108	112	Right-handed 310
Helix 37	AE1	L	8	20	Right-handed alpha
Helix 38	AE2	L	25	30	Right-handed 310
Helix 39	AE3	L	31	73	Right-handed alpha
Helix 40	AE4	L	75	86	Right-handed alpha
Helix 41	AE5	L	97	102	Right-handed alpha
Helix 42	AE6	L	102	117	Right-handed alpha
Helix 43	AE7	N	13	25	Right-handed alpha
Helix 44	AE8	N	28	39	Right-handed alpha
Helix 45	AE9	N	43	63	Right-handed alpha
Helix 46	AF1	O	14	21	Right-handed alpha
Helix 47	AF2	O	35	47	Right-handed alpha
Helix 48	AF3	P	13	17	Right-handed 310
Helix 49	AF4	R	2	8	Right-handed alpha
Helix 50	AF5	R	11	35	Right-handed alpha
Helix 51	AF6	R	40	65	Right-handed alpha
Helix 52	AF7	S	16	26	Right-handed alpha
Helix 53	AF8	S	40	50	Right-handed alpha
Helix 54	AF9	T	9	17	Right-handed alpha
Helix 55	AG1	T	18	20	Right-handed 310
Helix 56	AG2	U	8	17	Right-handed alpha
Helix 57	AG3	U	17	24	Right-handed alpha
Helix 58	AG4	U	24	38	Right-handed alpha
Helix 59	AG5	V	8	22	Right-handed alpha
Helix 60	AG6	V	70	87	Right-handed alpha
Helix 61	AG7	V	104	116	Right-handed alpha
Helix 62	AG8	W	15	24	Right-handed alpha
Helix 63	AG9	W	69	83	Right-handed alpha
Helix 64	AH1	W	97	110	Right-handed alpha
Helix 65	AH2	W	123	128	Right-handed 310
Helix 66	AH3	W	151	163	Right-handed alpha
Helix 67	AH4	W	187	197	Right-handed alpha
Helix 68	AH5	W	244	258	Right-handed alpha
Helix 69	AH6	W	272	285	Right-handed alpha
Helix 70	AH7	W	304	317	Right-handed alpha
Helix 71	AH8	W	335	351	Right-handed alpha
Helix 72	AH9	W	355	370	Right-handed alpha
Helix 73	AI1	W	406	421	Right-handed alpha
Helix 74	AI2	Y	22	30	Right-handed alpha
Helix 75	AI3	Y	52	58	Right-handed 310
Helix 76	AI4	Y	80	85	Right-handed 310
Helix 77	AI5	Y	100	105	Right-handed alpha
Helix 78	AI6	Y	120	126	Right-handed alpha
Helix 79	AI7	Y	148	157	Right-handed alpha
Helix 80	AI8	Y	183	199	Right-handed alpha

There are 43 sheets in PDB entry 9BS0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	5	first strand
Strand 2	C	17	19	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	35	first strand
Strand 2	C	62	63	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	105	first strand
Strand 2	C	91	96	anti-parallel
Strand 3	C	76	82	anti-parallel
Strand 4	C	115	116	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	131	first strand
Strand 2	C	189	192	anti-parallel
Strand 3	C	141	144	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	168	first strand
Strand 2	C	171	176	anti-parallel
Strand 3	C	180	184	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	16	first strand
Strand 2	D	22	29	anti-parallel
Strand 3	D	185	189	anti-parallel
Strand 4	D	168	180	anti-parallel
Strand 5	D	107	113	anti-parallel
Strand 6	D	199	204	anti-parallel
Strand 7	D	4	16	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	84	first strand
Strand 2	D	48	52	anti-parallel
Strand 3	D	33	39	anti-parallel
Strand 4	D	96	97	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	120	first strand
Strand 2	D	162	163	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	126	first strand
Strand 2	E	191	195	parallel
Strand 3	E	152	156	parallel
Strand 4	E	175	177	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	25	27	first strand
Strand 2	F	34	36	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	47	first strand
Strand 2	F	50	53	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	125	first strand
Strand 2	G	54	58	parallel
Strand 3	G	16	20	parallel
Strand 4	G	139	140	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	74	76	first strand
Strand 2	G	87	89	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	7	10	first strand
Strand 2	H	16	24	anti-parallel
Strand 3	H	38	46	anti-parallel
Strand 4	H	57	64	anti-parallel
Strand 5	H	83	86	anti-parallel
Strand 6	H	7	10	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	101	103	first strand
Strand 2	H	120	122	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	77	first strand
Strand 2	I	109	111	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	123	125	first strand
Strand 2	I	143	145	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	33	first strand
Strand 2	J	113	119	anti-parallel
Strand 3	J	99	106	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	74	first strand
Strand 2	K	61	68	anti-parallel
Strand 3	K	77	78	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	74	first strand
Strand 2	K	61	68	anti-parallel
Strand 3	K	48	52	anti-parallel
Strand 4	K	27	33	anti-parallel
Strand 5	K	84	92	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	14	first strand
Strand 2	M	3	7	anti-parallel
Strand 3	M	38	41	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	19	23	first strand
Strand 2	M	91	101	anti-parallel
Strand 3	M	57	67	anti-parallel
Strand 4	M	32	35	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	73	76	first strand
Strand 2	M	83	86	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	10	first strand
Strand 2	N	101	109	anti-parallel
Strand 3	N	69	77	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	82	87	first strand
Strand 2	N	93	98	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	8	11	first strand
Strand 2	O	25	30	anti-parallel
Strand 3	O	76	83	anti-parallel
Strand 4	O	51	59	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	63	66	first strand
Strand 2	O	69	72	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	20	21	first strand
Strand 2	P	9	11	anti-parallel
Strand 3	P	68	70	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	23	27	first strand
Strand 2	P	32	35	anti-parallel
Strand 3	P	63	64	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	40	43	first strand
Strand 2	P	57	60	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	81	82	first strand
Strand 2	P	93	94	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	38	39	first strand
Strand 2	Q	73	74	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	59	60	first strand
Strand 2	Q	68	69	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	79	80	first strand
Strand 2	Q	83	84	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	34	37	first strand
Strand 2	S	4	8	anti-parallel
Strand 3	S	54	57	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	48	49	first strand
Strand 2	T	52	53	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	33	35	first strand
Strand 2	V	40	46	anti-parallel
Strand 3	V	51	57	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	56	57	first strand
Strand 2	W	6	9	parallel
Strand 3	W	85	88	parallel
Strand 4	W	114	118	parallel
Strand 5	W	142	143	parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	215	220	first strand
Strand 2	W	223	228	anti-parallel
Strand 3	W	178	181	parallel
Strand 4	W	260	266	parallel
Strand 5	W	288	294	parallel
Strand 6	W	325	327	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	382	387	first strand
Strand 2	W	394	399	anti-parallel
Strand 3	W	429	433	parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	15	21	first strand
Strand 2	Z	3	9	anti-parallel
Strand 3	Z	43	47	anti-parallel
Strand 4	Z	32	34	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	170	177	first strand
Strand 2	Y	41	48	anti-parallel
Strand 3	Y	209	213	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	75	76	first strand
Strand 2	Y	113	114	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BS0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BS0