Analysis of interatomic Contacts of Structural Units in PDB entry:
9BUK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BUK entry

There is 1 chain in PDB entry 9BUK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 1538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 9BUK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 7Right-handed alpha
Helix 2
AA2
A
12 18Right-handed alpha
Helix 3
AA3
A
24 29Right-handed alpha
Helix 4
AA4
A
30 54Right-handed alpha
Helix 5
AA5
A
62 91Right-handed alpha
Helix 6
AA6
A
97 121Right-handed alpha
Helix 7
AA7
A
122 124Right-handed 310
Helix 8
AA8
A
129 157Right-handed alpha
Helix 9
AA9
A
161 184Right-handed alpha
Helix 10
AB1
A
199 204Right-handed alpha
Helix 11
AB2
A
206 208Right-handed 310
Helix 12
AB3
A
209 219Right-handed alpha
Helix 13
AB4
A
222 226Right-handed 310
Helix 14
AB5
A
234 260Right-handed alpha
Helix 15
AB6
A
311 318Right-handed alpha
Helix 16
AB7
A
320 350Right-handed alpha
Helix 17
AB8
A
357 404Right-handed alpha
Helix 18
AB9
A
405 407Right-handed 310
Helix 19
AC1
A
408 413Right-handed alpha
Helix 20
AC2
A
416 424Right-handed alpha
Helix 21
AC3
A
425 433Right-handed alpha
Helix 22
AC4
A
439 459Right-handed alpha
Helix 23
AC5
A
460 465Right-handed alpha
Helix 24
AC6
A
465 508Right-handed alpha
Helix 25
AC7
A
508 516Right-handed alpha
Helix 26
AC8
A
517 564Right-handed alpha
Helix 27
AC9
A
582 591Right-handed alpha
Helix 28
AD1
A
595 618Right-handed alpha
Helix 29
AD2
A
676 686Right-handed alpha
Helix 30
AD3
A
714 721Right-handed alpha
Helix 31
AD4
A
729 737Right-handed alpha
Helix 32
AD5
A
739 746Right-handed alpha
Helix 33
AD6
A
748 752Right-handed 310
Helix 34
AD7
A
762 778Right-handed alpha
Helix 35
AD8
A
792 803Right-handed alpha
Helix 36
AD9
A
824 828Right-handed 310
Helix 37
AE1
A
844 852Right-handed alpha
Helix 38
AE2
A
853 863Right-handed alpha
Helix 39
AE3
A
963 975Right-handed alpha
Helix 40
AE4
A
975 1004Right-handed alpha
Helix 41
AE5
A
1005 1008Right-handed 310
Helix 42
AE6
A
1018 1026Right-handed alpha
Helix 43
AE7
A
1027 1065Right-handed alpha
Helix 44
AE8
A
1068 1075Right-handed alpha
Helix 45
AE9
A
1076 1119Right-handed alpha
Helix 46
AF1
A
1120 1125Right-handed 310
Helix 47
AF2
A
1126 1155Right-handed alpha
Helix 48
AF3
A
1156 1168Right-handed alpha
Helix 49
AF4
A
1169 1176Right-handed alpha
Helix 50
AF5
A
1180 1229Right-handed alpha
Helix 51
AF6
A
1237 1275Right-handed alpha
Helix 52
AF7
A
1339 1346Right-handed alpha
Helix 53
AF8
A
1347 1349Right-handed 310
Helix 54
AF9
A
1364 1368Right-handed 310
Helix 55
AG1
A
1369 1373Right-handed 310
Helix 56
AG2
A
1390 1396Right-handed alpha
Helix 57
AG3
A
1402 1413Right-handed alpha
Helix 58
AG4
A
1415 1422Right-handed alpha
Helix 59
AG5
A
1431 1435Right-handed 310
Helix 60
AG6
A
1438 1451Right-handed alpha
Helix 61
AG7
A
1468 1483Right-handed alpha
Helix 62
AG8
A
1494 1499Right-handed alpha
Helix 63
AG9
A
1517 1524Right-handed alpha
Helix 64
AH1
A
1526 1536Right-handed alpha
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There are 5 sheets in PDB entry 9BUK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
627 629first strand
Strand 2
A
695 697parallel
Strand 3
A
637 639anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 657first strand
Strand 2
A
642 645anti-parallel
Strand 3
A
689 692anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 704first strand
Strand 2
A
781 785parallel
Strand 3
A
814 818parallel
Strand 4
A
666 670parallel
Strand 5
A
830 835parallel
Strand 6
A
838 843anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1317 1320first strand
Strand 2
A
1301 1307anti-parallel
Strand 3
A
1355 1359anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1378 1380first strand
Strand 2
A
1457 1461parallel
Strand 3
A
1487 1491parallel
Strand 4
A
1330 1334parallel
Strand 5
A
1503 1507parallel
Strand 6
A
1512 1516anti-parallel
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