Analysis of interatomic Contacts of Structural Units in PDB entry:
9BUO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BUO entry

There are 8 chains in PDB entry 9BUO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	LYS 32	GLY 295
H	ALA 31	GLU 292
A	LEU 19	ARG 418
B	MET 1	PHE 424
C	ARG 22	ARG 423
D	MET 1	SER 431
E	GLY 41	GLY 295
F	THR 29	LEU 293

There are123 helices in PDB entry 9BUO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	45	58	Right-handed alpha
Helix 2	AA2	G	74	79	Right-handed alpha
Helix 3	AA3	G	85	89	Right-handed 310
Helix 4	AA4	G	94	98	Right-handed 310
Helix 5	AA5	G	133	140	Right-handed alpha
Helix 6	AA6	G	164	169	Right-handed 310
Helix 7	AA7	G	180	198	Right-handed alpha
Helix 8	AA8	G	216	227	Right-handed alpha
Helix 9	AA9	G	230	234	Right-handed 310
Helix 10	AB1	G	240	244	Right-handed 310
Helix 11	AB2	G	249	253	Right-handed 310
Helix 12	AB3	G	260	273	Right-handed alpha
Helix 13	AB4	H	42	58	Right-handed alpha
Helix 14	AB5	H	74	79	Right-handed 310
Helix 15	AB6	H	84	92	Right-handed alpha
Helix 16	AB7	H	100	105	Right-handed alpha
Helix 17	AB8	H	126	141	Right-handed alpha
Helix 18	AB9	H	142	147	Right-handed alpha
Helix 19	AC1	H	160	165	Right-handed alpha
Helix 20	AC2	H	165	170	Right-handed alpha
Helix 21	AC3	H	180	198	Right-handed alpha
Helix 22	AC4	H	219	226	Right-handed alpha
Helix 23	AC5	H	259	276	Right-handed alpha
Helix 24	AC6	A	29	32	Right-handed 310
Helix 25	AC7	A	33	41	Right-handed alpha
Helix 26	AC8	A	51	63	Right-handed alpha
Helix 27	AC9	A	64	68	Right-handed 310
Helix 28	AD1	A	85	103	Right-handed alpha
Helix 29	AD2	A	114	120	Right-handed alpha
Helix 30	AD3	A	123	136	Right-handed alpha
Helix 31	AD4	A	154	165	Right-handed alpha
Helix 32	AD5	A	183	198	Right-handed alpha
Helix 33	AD6	A	230	239	Right-handed alpha
Helix 34	AD7	A	253	267	Right-handed alpha
Helix 35	AD8	A	269	293	Right-handed alpha
Helix 36	AD9	A	308	320	Right-handed alpha
Helix 37	AE1	A	337	344	Right-handed alpha
Helix 38	AE2	A	355	366	Right-handed alpha
Helix 39	AE3	A	374	384	Right-handed alpha
Helix 40	AE4	A	391	397	Right-handed alpha
Helix 41	AE5	A	404	414	Right-handed alpha
Helix 42	AE6	B	11	23	Right-handed alpha
Helix 43	AE7	B	35	37	Right-handed 310
Helix 44	AE8	B	38	46	Right-handed alpha
Helix 45	AE9	B	66	83	Right-handed alpha
Helix 46	AF1	B	94	100	Right-handed alpha
Helix 47	AF2	B	103	112	Right-handed alpha
Helix 48	AF3	B	128	145	Right-handed alpha
Helix 49	AF4	B	167	183	Right-handed alpha
Helix 50	AF5	B	195	202	Right-handed alpha
Helix 51	AF6	B	203	205	Right-handed 310
Helix 52	AF7	B	212	227	Right-handed alpha
Helix 53	AF8	B	238	254	Right-handed alpha
Helix 54	AF9	B	265	272	Right-handed alpha
Helix 55	AG1	B	273	277	Right-handed 310
Helix 56	AG2	B	288	300	Right-handed alpha
Helix 57	AG3	B	314	316	Right-handed 310
Helix 58	AG4	B	317	328	Right-handed alpha
Helix 59	AG5	B	337	349	Right-handed alpha
Helix 60	AG6	B	356	367	Right-handed alpha
Helix 61	AG7	B	390	418	Right-handed alpha
Helix 62	AG8	C	31	41	Right-handed alpha
Helix 63	AG9	C	51	63	Right-handed alpha
Helix 64	AH1	C	64	69	Right-handed 310
Helix 65	AH2	C	79	84	Right-handed alpha
Helix 66	AH3	C	84	103	Right-handed alpha
Helix 67	AH4	C	114	120	Right-handed alpha
Helix 68	AH5	C	123	131	Right-handed alpha
Helix 69	AH6	C	154	168	Right-handed alpha
Helix 70	AH7	C	183	197	Right-handed alpha
Helix 71	AH8	C	229	239	Right-handed alpha
Helix 72	AH9	C	252	267	Right-handed alpha
Helix 73	AI1	C	270	277	Right-handed alpha
Helix 74	AI2	C	277	292	Right-handed alpha
Helix 75	AI3	C	308	319	Right-handed alpha
Helix 76	AI4	C	333	344	Right-handed alpha
Helix 77	AI5	C	355	367	Right-handed alpha
Helix 78	AI6	C	374	384	Right-handed alpha
Helix 79	AI7	C	391	397	Right-handed alpha
Helix 80	AI8	C	405	423	Right-handed alpha
Helix 81	AI9	D	11	23	Right-handed alpha
Helix 82	AJ1	D	37	47	Right-handed alpha
Helix 83	AJ2	D	65	85	Right-handed alpha
Helix 84	AJ3	D	95	100	Right-handed alpha
Helix 85	AJ4	D	105	111	Right-handed alpha
Helix 86	AJ5	D	128	145	Right-handed alpha
Helix 87	AJ6	D	169	183	Right-handed alpha
Helix 88	AJ7	D	195	201	Right-handed alpha
Helix 89	AJ8	D	202	204	Right-handed 310
Helix 90	AJ9	D	216	226	Right-handed alpha
Helix 91	AK1	D	239	254	Right-handed alpha
Helix 92	AK2	D	260	264	Right-handed 310
Helix 93	AK3	D	265	271	Right-handed alpha
Helix 94	AK4	D	272	276	Right-handed 310
Helix 95	AK5	D	288	302	Right-handed alpha
Helix 96	AK6	D	314	316	Right-handed 310
Helix 97	AK7	D	317	328	Right-handed alpha
Helix 98	AK8	D	337	349	Right-handed alpha
Helix 99	AK9	D	356	367	Right-handed alpha
Helix 100	AL1	D	378	382	Right-handed 310
Helix 101	AL2	D	390	418	Right-handed alpha
Helix 102	AL3	D	419	422	Right-handed 310
Helix 103	AL4	E	44	49	Right-handed alpha
Helix 104	AL5	E	52	59	Right-handed alpha
Helix 105	AL6	E	73	77	Right-handed 310
Helix 106	AL7	E	138	142	Right-handed 310
Helix 107	AL8	E	180	197	Right-handed alpha
Helix 108	AL9	E	217	227	Right-handed alpha
Helix 109	AM1	E	241	246	Right-handed alpha
Helix 110	AM2	E	255	259	Right-handed 310
Helix 111	AM3	E	262	270	Right-handed alpha
Helix 112	AM4	E	286	291	Right-handed alpha
Helix 113	AM5	F	43	59	Right-handed alpha
Helix 114	AM6	F	74	79	Right-handed alpha
Helix 115	AM7	F	84	92	Right-handed alpha
Helix 116	AM8	F	109	111	Right-handed 310
Helix 117	AM9	F	128	141	Right-handed alpha
Helix 118	AN1	F	142	147	Right-handed alpha
Helix 119	AN2	F	165	169	Right-handed 310
Helix 120	AN3	F	180	199	Right-handed alpha
Helix 121	AN4	F	216	226	Right-handed alpha
Helix 122	AN5	F	242	248	Right-handed alpha
Helix 123	AN6	F	256	276	Right-handed alpha

There are 18 sheets in PDB entry 9BUO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	36	37	first strand
Strand 2	G	174	175	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	63	65	first strand
Strand 2	G	113	115	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	106	108	first strand
Strand 2	H	112	116	anti-parallel
Strand 3	H	64	66	parallel
Strand 4	H	149	155	parallel
Strand 5	H	32	38	parallel
Strand 6	H	172	175	parallel
Strand 7	H	207	208	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	48	first strand
Strand 2	A	108	113	parallel
Strand 3	A	142	145	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	204	first strand
Strand 2	A	176	179	parallel
Strand 3	A	222	224	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	302	first strand
Strand 2	A	323	327	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	57	first strand
Strand 2	B	26	30	parallel
Strand 3	B	88	91	parallel
Strand 4	B	117	119	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	186	first strand
Strand 2	B	155	159	parallel
Strand 3	B	207	210	parallel
Strand 4	B	231	232	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	334	first strand
Strand 2	B	306	312	parallel
Strand 3	B	282	285	parallel
Strand 4	B	352	355	parallel
Strand 5	B	370	372	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	113	first strand
Strand 2	C	44	50	parallel
Strand 3	C	72	76	parallel
Strand 4	D	3	4	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	221	223	first strand
Strand 2	C	242	244	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	323	324	first strand
Strand 2	C	299	301	parallel
Strand 3	C	370	371	parallel
Strand 4	C	387	388	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	328	first strand
Strand 2	C	349	351	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	57	first strand
Strand 2	D	26	31	parallel
Strand 3	D	88	93	parallel
Strand 4	D	117	119	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	185	186	first strand
Strand 2	D	155	159	parallel
Strand 3	D	207	210	parallel
Strand 4	D	231	232	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	306	310	first strand
Strand 2	D	282	285	parallel
Strand 3	D	352	355	parallel
Strand 4	D	370	372	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	177	178	first strand
Strand 2	E	210	211	parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	106	107	first strand
Strand 2	F	113	116	anti-parallel
Strand 3	F	62	66	parallel
Strand 4	F	149	153	parallel
Strand 5	F	32	37	parallel
Strand 6	F	172	177	parallel
Strand 7	F	204	210	parallel
Strand 8	F	230	231	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BUO

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BUO