Analysis of interatomic Contacts of Structural Units in PDB entry:
9BUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BUV entry

There is 1 chain in PDB entry 9BUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 29THR 601
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9BUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 47Right-handed alpha
Helix 2
AA2
A
52 62Right-handed alpha
Helix 3
AA3
A
67 83Right-handed alpha
Helix 4
AA4
A
87 118Right-handed alpha
Helix 5
AA5
A
121 146Right-handed alpha
Helix 6
AA6
A
155 181Right-handed alpha
Helix 7
AA7
A
183 217Right-handed alpha
Helix 8
AA8
A
220 238Right-handed alpha
Helix 9
AA9
A
238 243Right-handed alpha
Helix 10
AB1
A
244 249Right-handed 310
Helix 11
AB2
A
268 273Right-handed alpha
Helix 12
AB3
A
282 289Right-handed alpha
Helix 13
AB4
A
403 405Right-handed 310
Helix 14
AB5
A
414 419Right-handed alpha
Helix 15
AB6
A
434 436Right-handed 310
Helix 16
AB7
A
470 472Right-handed 310
Helix 17
AB8
A
555 559Right-handed 310
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There are 8 sheets in PDB entry 9BUV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
464 468parallel
Strand 3
A
590 600anti-parallel
Strand 4
A
492 495anti-parallel
Strand 5
A
480 482anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
464 468parallel
Strand 3
A
590 600anti-parallel
Strand 4
A
515 524anti-parallel
Strand 5
A
560 563anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 267first strand
Strand 2
A
440 450anti-parallel
Strand 3
A
374 385parallel
Strand 4
A
355 366anti-parallel
Strand 5
A
400 401anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 394first strand
Strand 2
A
374 385anti-parallel
Strand 3
A
440 450parallel
Strand 4
A
421 432anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 332first strand
Strand 2
A
313 324anti-parallel
Strand 3
A
336 337anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 332first strand
Strand 2
A
313 324anti-parallel
Strand 3
A
299 310anti-parallel
Strand 4
A
345 348anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 459first strand
Strand 2
A
499 508parallel
Strand 3
A
474 475anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 459first strand
Strand 2
A
499 508parallel
Strand 3
A
574 582anti-parallel
Strand 4
A
528 534anti-parallel
Strand 5
A
538 544anti-parallel
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