Analysis of interatomic Contacts of Structural Units in PDB entry:
9BVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BVQ entry

There are 2 chains in PDB entry 9BVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 31PHE 728
P
 GLU 25GLY 98
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9BVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 39Right-handed alpha
Helix 2
AA2
A
41 46Right-handed 310
Helix 3
AA3
A
47 55Right-handed alpha
Helix 4
AA4
A
61 79Right-handed alpha
Helix 5
AA5
A
87 91Right-handed 310
Helix 6
AA6
A
111 132Right-handed alpha
Helix 7
AA7
A
134 153Right-handed alpha
Helix 8
AA8
A
154 157Right-handed 310
Helix 9
AA9
A
158 174Right-handed alpha
Helix 10
AB1
A
181 187Right-handed alpha
Helix 11
AB2
A
197 218Right-handed alpha
Helix 12
AB3
A
229 244Right-handed 310
Helix 13
AB4
A
246 254Right-handed alpha
Helix 14
AB5
A
256 270Right-handed alpha
Helix 15
AB6
A
275 294Right-handed alpha
Helix 16
AB7
A
298 307Right-handed alpha
Helix 17
AB8
A
308 311Right-handed 310
Helix 18
AB9
A
314 321Right-handed alpha
Helix 19
AC1
A
358 377Right-handed alpha
Helix 20
AC2
A
378 380Right-handed 310
Helix 21
AC3
A
384 388Right-handed 310
Helix 22
AC4
A
440 455Right-handed alpha
Helix 23
AC5
A
456 459Right-handed 310
Helix 24
AC6
A
511 523Right-handed alpha
Helix 25
AC7
A
605 627Right-handed alpha
Helix 26
AC8
A
638 644Right-handed alpha
Helix 27
AC9
A
653 674Right-handed alpha
Helix 28
AD1
A
676 709Right-handed alpha
Helix 29
AD2
A
712 724Right-handed alpha
Helix 30
AD3
P
33 38Right-handed alpha
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There are 3 sheets in PDB entry 9BVQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 480first strand
Strand 2
A
464 473anti-parallel
Strand 3
A
406 416anti-parallel
Strand 4
A
423 426anti-parallel
Strand 5
P
31 32anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
528 534first strand
Strand 2
A
597 603anti-parallel
Strand 3
A
551 557anti-parallel
Strand 4
A
578 581anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 543first strand
Strand 2
A
586 591anti-parallel
Strand 3
A
560 564anti-parallel
Strand 4
A
569 573anti-parallel
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