Analysis of interatomic Contacts of Structural Units in PDB entry:
9BWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BWV entry

There are 8 chains in PDB entry 9BWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8GLY 496
C
 THR 8GLY 496
E
 THR 8GLY 496
H
 THR 8GLY 496
B
 U 1 U 20
D
 U 1 U 20
F
 U 1 U 20
G
 U 1 U 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 9BWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 35Right-handed alpha
Helix 2
AA2
A
38 42Right-handed 310
Helix 3
AA3
A
43 59Right-handed alpha
Helix 4
AA4
A
59 71Right-handed alpha
Helix 5
AA5
A
73 81Right-handed alpha
Helix 6
AA6
A
104 116Right-handed alpha
Helix 7
AA7
A
121 145Right-handed alpha
Helix 8
AA8
A
146 154Right-handed alpha
Helix 9
AA9
A
156 163Right-handed alpha
Helix 10
AB1
A
171 176Right-handed alpha
Helix 11
AB2
A
181 199Right-handed alpha
Helix 12
AB3
A
217 230Right-handed alpha
Helix 13
AB4
A
233 242Right-handed alpha
Helix 14
AB5
A
243 245Right-handed 310
Helix 15
AB6
A
246 264Right-handed alpha
Helix 16
AB7
A
275 289Right-handed alpha
Helix 17
AB8
A
294 299Right-handed 310
Helix 18
AB9
A
304 314Right-handed alpha
Helix 19
AC1
A
334 348Right-handed alpha
Helix 20
AC2
A
349 352Right-handed 310
Helix 21
AC3
A
353 361Right-handed alpha
Helix 22
AC4
A
430 443Right-handed alpha
Helix 23
AC5
A
447 467Right-handed alpha
Helix 24
AC6
A
480 484Right-handed 310
Helix 25
AC7
C
9 35Right-handed alpha
Helix 26
AC8
C
38 42Right-handed 310
Helix 27
AC9
C
43 59Right-handed alpha
Helix 28
AD1
C
59 71Right-handed alpha
Helix 29
AD2
C
73 81Right-handed alpha
Helix 30
AD3
C
104 116Right-handed alpha
Helix 31
AD4
C
121 145Right-handed alpha
Helix 32
AD5
C
146 154Right-handed alpha
Helix 33
AD6
C
156 163Right-handed alpha
Helix 34
AD7
C
171 176Right-handed alpha
Helix 35
AD8
C
181 199Right-handed alpha
Helix 36
AD9
C
217 230Right-handed alpha
Helix 37
AE1
C
233 242Right-handed alpha
Helix 38
AE2
C
243 245Right-handed 310
Helix 39
AE3
C
246 264Right-handed alpha
Helix 40
AE4
C
275 289Right-handed alpha
Helix 41
AE5
C
294 299Right-handed 310
Helix 42
AE6
C
304 314Right-handed alpha
Helix 43
AE7
C
334 348Right-handed alpha
Helix 44
AE8
C
349 352Right-handed 310
Helix 45
AE9
C
353 361Right-handed alpha
Helix 46
AF1
C
430 443Right-handed alpha
Helix 47
AF2
C
447 467Right-handed alpha
Helix 48
AF3
C
480 484Right-handed 310
Helix 49
AF4
E
9 35Right-handed alpha
Helix 50
AF5
E
38 42Right-handed 310
Helix 51
AF6
E
43 59Right-handed alpha
Helix 52
AF7
E
59 71Right-handed alpha
Helix 53
AF8
E
73 81Right-handed alpha
Helix 54
AF9
E
104 116Right-handed alpha
Helix 55
AG1
E
121 145Right-handed alpha
Helix 56
AG2
E
146 154Right-handed alpha
Helix 57
AG3
E
156 163Right-handed alpha
Helix 58
AG4
E
171 176Right-handed alpha
Helix 59
AG5
E
181 199Right-handed alpha
Helix 60
AG6
E
217 230Right-handed alpha
Helix 61
AG7
E
233 242Right-handed alpha
Helix 62
AG8
E
243 245Right-handed 310
Helix 63
AG9
E
246 264Right-handed alpha
Helix 64
AH1
E
275 289Right-handed alpha
Helix 65
AH2
E
294 299Right-handed 310
Helix 66
AH3
E
304 314Right-handed alpha
Helix 67
AH4
E
334 348Right-handed alpha
Helix 68
AH5
E
349 352Right-handed 310
Helix 69
AH6
E
353 361Right-handed alpha
Helix 70
AH7
E
430 443Right-handed alpha
Helix 71
AH8
E
447 467Right-handed alpha
Helix 72
AH9
E
480 484Right-handed 310
Helix 73
AI1
H
9 35Right-handed alpha
Helix 74
AI2
H
38 42Right-handed 310
Helix 75
AI3
H
43 59Right-handed alpha
Helix 76
AI4
H
59 71Right-handed alpha
Helix 77
AI5
H
73 81Right-handed alpha
Helix 78
AI6
H
104 116Right-handed alpha
Helix 79
AI7
H
121 145Right-handed alpha
Helix 80
AI8
H
146 154Right-handed alpha
Helix 81
AI9
H
156 163Right-handed alpha
Helix 82
AJ1
H
171 176Right-handed alpha
Helix 83
AJ2
H
181 199Right-handed alpha
Helix 84
AJ3
H
217 230Right-handed alpha
Helix 85
AJ4
H
233 242Right-handed alpha
Helix 86
AJ5
H
243 245Right-handed 310
Helix 87
AJ6
H
246 264Right-handed alpha
Helix 88
AJ7
H
275 289Right-handed alpha
Helix 89
AJ8
H
294 299Right-handed 310
Helix 90
AJ9
H
304 314Right-handed alpha
Helix 91
AK1
H
334 348Right-handed alpha
Helix 92
AK2
H
349 352Right-handed 310
Helix 93
AK3
H
353 361Right-handed alpha
Helix 94
AK4
H
430 443Right-handed alpha
Helix 95
AK5
H
447 467Right-handed alpha
Helix 96
AK6
H
480 484Right-handed 310
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There are 8 sheets in PDB entry 9BWV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 91first strand
Strand 2
A
94 103anti-parallel
Strand 3
A
382 386anti-parallel
Strand 4
A
318 321anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
212 216anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 91first strand
Strand 2
C
94 103anti-parallel
Strand 3
C
382 386anti-parallel
Strand 4
C
318 321anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
206 208first strand
Strand 2
C
212 216anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
82 91first strand
Strand 2
E
94 103anti-parallel
Strand 3
E
382 386anti-parallel
Strand 4
E
318 321anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
206 208first strand
Strand 2
E
212 216anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
82 91first strand
Strand 2
H
94 103anti-parallel
Strand 3
H
382 386anti-parallel
Strand 4
H
318 321anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
206 208first strand
Strand 2
H
212 216anti-parallel
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