Analysis of interatomic Contacts of Structural Units in PDB entry:
9BXA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BXA entry

There are 7 chains in PDB entry 9BXA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 1217
B	ASN 19	VAL 110
C	ASN 19	VAL 110
D	ASN 19	VAL 110
E	VAL 17	TYR 103
F	VAL 17	TYR 103
G	VAL 17	TYR 103

There are 36 helices in PDB entry 9BXA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	45	Right-handed alpha
Helix 2	AA2	A	88	93	Right-handed alpha
Helix 3	AA3	A	138	142	Right-handed 310
Helix 4	AA4	A	223	233	Right-handed alpha
Helix 5	AA5	A	248	253	Right-handed alpha
Helix 6	AA6	A	337	344	Right-handed alpha
Helix 7	AA7	A	416	423	Right-handed alpha
Helix 8	AA8	A	476	482	Right-handed alpha
Helix 9	AA9	A	536	541	Right-handed alpha
Helix 10	AB1	A	579	584	Right-handed alpha
Helix 11	AB2	A	585	587	Right-handed 310
Helix 12	AB3	A	670	674	Right-handed 310
Helix 13	AB4	A	680	684	Right-handed 310
Helix 14	AB5	A	686	691	Right-handed alpha
Helix 15	AB6	A	769	776	Right-handed alpha
Helix 16	AB7	A	819	823	Right-handed 310
Helix 17	AB8	A	866	872	Right-handed alpha
Helix 18	AB9	A	937	942	Right-handed alpha
Helix 19	AC1	A	1051	1055	Right-handed 310
Helix 20	AC2	A	1066	1070	Right-handed 310
Helix 21	AC3	A	1081	1089	Right-handed alpha
Helix 22	AC4	A	1213	1217	Right-handed 310
Helix 23	AC5	B	20	29	Right-handed alpha
Helix 24	AC6	B	92	94	Right-handed 310
Helix 25	AC7	C	20	29	Right-handed alpha
Helix 26	AC8	C	92	94	Right-handed 310
Helix 27	AC9	D	20	29	Right-handed alpha
Helix 28	AD1	E	18	32	Right-handed alpha
Helix 29	AD2	E	69	73	Right-handed 310
Helix 30	AD3	E	82	84	Right-handed 310
Helix 31	AD4	F	18	31	Right-handed alpha
Helix 32	AD5	F	69	73	Right-handed 310
Helix 33	AD6	F	82	84	Right-handed 310
Helix 34	AD7	G	18	31	Right-handed alpha
Helix 35	AD8	G	69	73	Right-handed 310
Helix 36	AD9	G	82	84	Right-handed 310

There are 29 sheets in PDB entry 9BXA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	31	first strand
Strand 2	A	2	15	anti-parallel
Strand 3	A	65	72	parallel
Strand 4	A	110	116	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	61	first strand
Strand 2	A	145	150	parallel
Strand 3	A	121	125	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	157	first strand
Strand 2	A	171	174	anti-parallel
Strand 3	A	181	190	anti-parallel
Strand 4	A	215	217	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	157	first strand
Strand 2	A	171	174	anti-parallel
Strand 3	A	181	190	anti-parallel
Strand 4	A	268	274	parallel
Strand 5	A	311	315	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	204	first strand
Strand 2	A	209	210	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	262	first strand
Strand 2	A	346	351	parallel
Strand 3	A	329	335	anti-parallel
Strand 4	A	281	285	anti-parallel
Strand 5	A	304	307	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	291	first strand
Strand 2	A	301	302	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	473	first strand
Strand 2	A	443	453	anti-parallel
Strand 3	A	498	506	parallel
Strand 4	A	558	565	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	457	first strand
Strand 2	A	464	465	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	495	first strand
Strand 2	A	589	595	parallel
Strand 3	A	572	575	anti-parallel
Strand 4	A	529	530	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	600	603	first strand
Strand 2	A	615	619	anti-parallel
Strand 3	A	626	634	anti-parallel
Strand 4	A	663	664	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	600	603	first strand
Strand 2	A	615	619	anti-parallel
Strand 3	A	626	634	anti-parallel
Strand 4	A	705	712	parallel
Strand 5	A	750	756	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	697	700	first strand
Strand 2	A	778	783	parallel
Strand 3	A	761	766	anti-parallel
Strand 4	A	719	724	anti-parallel
Strand 5	A	742	745	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	728	729	first strand
Strand 2	A	739	740	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	854	863	first strand
Strand 2	A	834	847	anti-parallel
Strand 3	A	889	896	parallel
Strand 4	A	960	965	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	880	885	first strand
Strand 2	A	990	996	parallel
Strand 3	A	971	976	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1001	1003	first strand
Strand 2	A	1016	1020	anti-parallel
Strand 3	A	1027	1038	anti-parallel
Strand 4	A	1072	1075	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1001	1003	first strand
Strand 2	A	1016	1020	anti-parallel
Strand 3	A	1027	1038	anti-parallel
Strand 4	A	1117	1122	parallel
Strand 5	A	1163	1167	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1109	1111	first strand
Strand 2	A	1198	1203	parallel
Strand 3	A	1180	1186	anti-parallel
Strand 4	A	1131	1135	anti-parallel
Strand 5	A	1154	1158	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1140	1141	first strand
Strand 2	A	1151	1152	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	82	first strand
Strand 2	B	65	75	anti-parallel
Strand 3	B	87	90	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	82	first strand
Strand 2	B	65	75	anti-parallel
Strand 3	B	53	61	anti-parallel
Strand 4	B	33	37	anti-parallel
Strand 5	B	96	98	anti-parallel
Strand 6	G	75	80	anti-parallel
Strand 7	G	59	67	anti-parallel
Strand 8	G	47	56	anti-parallel
Strand 9	G	36	40	anti-parallel
Strand 10	G	86	89	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	45	first strand
Strand 2	B	48	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	65	73	anti-parallel
Strand 3	C	87	90	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	65	73	anti-parallel
Strand 3	C	53	61	anti-parallel
Strand 4	C	33	37	anti-parallel
Strand 5	C	96	99	anti-parallel
Strand 6	E	76	80	anti-parallel
Strand 7	E	59	67	anti-parallel
Strand 8	E	47	56	anti-parallel
Strand 9	E	36	40	anti-parallel
Strand 10	E	86	89	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	45	first strand
Strand 2	C	48	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	82	first strand
Strand 2	D	65	73	anti-parallel
Strand 3	D	87	90	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	82	first strand
Strand 2	D	65	73	anti-parallel
Strand 3	D	53	61	anti-parallel
Strand 4	D	33	38	anti-parallel
Strand 5	D	94	98	anti-parallel
Strand 6	F	76	80	anti-parallel
Strand 7	F	59	64	anti-parallel
Strand 8	F	47	56	anti-parallel
Strand 9	F	36	40	anti-parallel
Strand 10	F	86	89	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	45	first strand
Strand 2	D	48	50	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BXA

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BXA