Analysis of interatomic Contacts of Structural Units in PDB entry:
9BXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BXJ entry

There is 1 chain in PDB entry 9BXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ALA 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9BXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 7Right-handed 310
Helix 2
AA2
A
8 21Right-handed alpha
Helix 3
AA3
A
29 42Right-handed alpha
Helix 4
AA4
A
57 64Right-handed alpha
Helix 5
AA5
A
76 90Right-handed alpha
Helix 6
AA6
A
111 114Right-handed 310
Helix 7
AA7
A
118 120Right-handed 310
Helix 8
AA8
A
147 151Right-handed 310
Helix 9
AA9
A
153 164Right-handed alpha
Helix 10
AB1
A
185 189Right-handed 310
Helix 11
AB2
A
201 211Right-handed alpha
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There are 4 sheets in PDB entry 9BXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 126first strand
Strand 2
A
69 74parallel
Strand 3
A
48 52parallel
Strand 4
A
139 145parallel
Strand 5
A
165 175parallel
Strand 6
A
234 246anti-parallel
Strand 7
A
214 216anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 126first strand
Strand 2
A
69 74parallel
Strand 3
A
48 52parallel
Strand 4
A
139 145parallel
Strand 5
A
165 175parallel
Strand 6
A
234 246anti-parallel
Strand 7
A
221 228anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 99first strand
Strand 2
A
102 109anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
198 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il