Analysis of interatomic Contacts of Structural Units in PDB entry:
9BXT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9BXT entry

There are 5 chains in PDB entry 9BXT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6LYS 688
B
 VAL 6LYS 688
C
 THR 311PHE 322
D
 THR 311PHE 322
E
 VAL 19LEU 104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 9BXT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 14Right-handed alpha
Helix 2
AA2
A
15 17Right-handed 310
Helix 3
AA3
A
27 40Right-handed alpha
Helix 4
AA4
A
50 61Right-handed alpha
Helix 5
AA5
A
65 71Right-handed alpha
Helix 6
AA6
A
73 87Right-handed alpha
Helix 7
AA7
A
93 104Right-handed alpha
Helix 8
AA8
A
117 131Right-handed alpha
Helix 9
AA9
A
133 146Right-handed alpha
Helix 10
AB1
A
152 159Right-handed alpha
Helix 11
AB2
A
178 194Right-handed alpha
Helix 12
AB3
A
222 237Right-handed alpha
Helix 13
AB4
A
238 242Right-handed 310
Helix 14
AB5
A
257 264Right-handed alpha
Helix 15
AB6
A
285 294Right-handed alpha
Helix 16
AB7
A
302 311Right-handed alpha
Helix 17
AB8
A
313 317Right-handed 310
Helix 18
AB9
A
318 328Right-handed alpha
Helix 19
AC1
A
338 354Right-handed alpha
Helix 20
AC2
A
361 367Right-handed alpha
Helix 21
AC3
A
416 422Right-handed alpha
Helix 22
AC4
A
424 443Right-handed alpha
Helix 23
AC5
A
448 459Right-handed alpha
Helix 24
AC6
A
467 475Right-handed alpha
Helix 25
AC7
A
481 511Right-handed alpha
Helix 26
AC8
A
520 525Right-handed alpha
Helix 27
AC9
A
528 534Right-handed alpha
Helix 28
AD1
A
540 547Right-handed alpha
Helix 29
AD2
A
554 569Right-handed alpha
Helix 30
AD3
A
582 588Right-handed alpha
Helix 31
AD4
A
628 632Right-handed 310
Helix 32
AD5
A
633 646Right-handed alpha
Helix 33
AD6
A
663 677Right-handed alpha
Helix 34
AD7
B
7 15Right-handed alpha
Helix 35
AD8
B
27 40Right-handed alpha
Helix 36
AD9
B
50 61Right-handed alpha
Helix 37
AE1
B
65 71Right-handed alpha
Helix 38
AE2
B
73 86Right-handed alpha
Helix 39
AE3
B
93 104Right-handed alpha
Helix 40
AE4
B
117 131Right-handed alpha
Helix 41
AE5
B
133 146Right-handed alpha
Helix 42
AE6
B
152 159Right-handed alpha
Helix 43
AE7
B
178 195Right-handed alpha
Helix 44
AE8
B
221 237Right-handed alpha
Helix 45
AE9
B
238 242Right-handed 310
Helix 46
AF1
B
257 264Right-handed alpha
Helix 47
AF2
B
285 295Right-handed alpha
Helix 48
AF3
B
302 311Right-handed alpha
Helix 49
AF4
B
313 317Right-handed 310
Helix 50
AF5
B
318 328Right-handed alpha
Helix 51
AF6
B
338 354Right-handed alpha
Helix 52
AF7
B
361 366Right-handed alpha
Helix 53
AF8
B
416 422Right-handed alpha
Helix 54
AF9
B
424 443Right-handed alpha
Helix 55
AG1
B
448 459Right-handed alpha
Helix 56
AG2
B
467 475Right-handed alpha
Helix 57
AG3
B
481 511Right-handed alpha
Helix 58
AG4
B
520 525Right-handed alpha
Helix 59
AG5
B
528 534Right-handed alpha
Helix 60
AG6
B
540 547Right-handed alpha
Helix 61
AG7
B
554 569Right-handed alpha
Helix 62
AG8
B
583 588Right-handed alpha
Helix 63
AG9
B
628 632Right-handed 310
Helix 64
AH1
B
633 646Right-handed alpha
Helix 65
AH2
B
663 678Right-handed alpha
Helix 66
AH3
C
316 320Right-handed 310
Helix 67
AH4
E
29 47Right-handed alpha
Helix 68
AH5
E
60 67Right-handed alpha
Helix 69
AH6
E
92 102Right-handed alpha
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There are 11 sheets in PDB entry 9BXT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
411 415anti-parallel
Strand 3
A
462 466parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
170 174anti-parallel
Strand 3
A
198 202parallel
Strand 4
A
247 252parallel
Strand 5
A
278 284parallel
Strand 6
A
357 360parallel
Strand 7
A
681 682anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 301first strand
Strand 2
A
334 337anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 606first strand
Strand 2
A
609 614anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
655 659first strand
Strand 2
A
684 688parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 151first strand
Strand 2
B
407 415anti-parallel
Strand 3
B
461 466parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 151first strand
Strand 2
B
407 415anti-parallel
Strand 3
B
170 174anti-parallel
Strand 4
B
198 202parallel
Strand 5
B
247 252parallel
Strand 6
B
278 284parallel
Strand 7
B
357 360parallel
Strand 8
B
681 682anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 301first strand
Strand 2
B
334 337anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
601 605first strand
Strand 2
B
610 614anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
655 659first strand
Strand 2
B
684 688parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
51 56first strand
Strand 2
E
20 25parallel
Strand 3
E
74 79anti-parallel
Strand 4
E
82 88anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il