Analysis of interatomic Contacts of Structural Units in PDB entry:
9BXU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9BXU entry

There are 29 chains in PDB entry 9BXU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
8	GLN 3	TYR 33
D	ALA 100	HIS 569
E	ALA 100	ALA 566
F	ALA 100	ALA 566
G	ALA 26	LEU 297
H	GLN 37	ALA 166
I	VAL 1	LYS 48
J	PRO 30	GLU 77
K	ILE 2	PHE 73
L	ILE 2	PHE 73
M	ILE 2	PHE 73
N	ILE 2	PHE 73
O	ILE 2	PHE 73
P	ILE 2	PHE 73
Q	ILE 2	PHE 73
R	ILE 2	PHE 73
S	PHE 1	ARG 187
T	VAL 16	ALA 96
U	PRO 3	ALA 45
V	PRO 25	PRO 236
W	LYS 105	HIS 185
a	ASN 4	ASP 224
c	GLN 8	SER 76
d	ARG 4	ARG 156
i	GLN 8	LYS 49
k	UNK 1	UNK 29
A	LYS 45	ALA 553
C	SER 52	ALA 553
B	SER 65	GLU 552

There are217 helices in PDB entry 9BXU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	8	9	30	Right-handed alpha
Helix 2	AA2	D	179	183	Right-handed 310
Helix 3	AA3	D	214	218	Right-handed 310
Helix 4	AA4	D	229	236	Right-handed alpha
Helix 5	AA5	D	253	266	Right-handed alpha
Helix 6	AA6	D	281	295	Right-handed alpha
Helix 7	AA7	D	317	322	Right-handed alpha
Helix 8	AA8	D	323	338	Right-handed alpha
Helix 9	AA9	D	351	356	Right-handed alpha
Helix 10	AB1	D	357	359	Right-handed 310
Helix 11	AB2	D	361	365	Right-handed 310
Helix 12	AB3	D	369	373	Right-handed 310
Helix 13	AB4	D	376	386	Right-handed alpha
Helix 14	AB5	D	405	408	Right-handed 310
Helix 15	AB6	D	411	416	Right-handed alpha
Helix 16	AB7	D	417	421	Right-handed 310
Helix 17	AB8	D	428	434	Right-handed alpha
Helix 18	AB9	D	451	456	Right-handed alpha
Helix 19	AC1	D	456	483	Right-handed alpha
Helix 20	AC2	D	484	488	Right-handed 310
Helix 21	AC3	D	489	506	Right-handed alpha
Helix 22	AC4	D	513	518	Right-handed alpha
Helix 23	AC5	D	525	539	Right-handed alpha
Helix 24	AC6	D	545	550	Right-handed 310
Helix 25	AC7	D	555	569	Right-handed alpha
Helix 26	AC8	E	214	218	Right-handed 310
Helix 27	AC9	E	229	236	Right-handed alpha
Helix 28	AD1	E	253	269	Right-handed alpha
Helix 29	AD2	E	281	296	Right-handed alpha
Helix 30	AD3	E	317	322	Right-handed alpha
Helix 31	AD4	E	323	340	Right-handed alpha
Helix 32	AD5	E	349	364	Right-handed alpha
Helix 33	AD6	E	369	373	Right-handed 310
Helix 34	AD7	E	376	386	Right-handed alpha
Helix 35	AD8	E	404	408	Right-handed 310
Helix 36	AD9	E	411	418	Right-handed alpha
Helix 37	AE1	E	428	435	Right-handed alpha
Helix 38	AE2	E	451	456	Right-handed alpha
Helix 39	AE3	E	457	480	Right-handed alpha
Helix 40	AE4	E	484	488	Right-handed 310
Helix 41	AE5	E	489	506	Right-handed alpha
Helix 42	AE6	E	513	518	Right-handed alpha
Helix 43	AE7	E	525	539	Right-handed alpha
Helix 44	AE8	E	545	550	Right-handed 310
Helix 45	AE9	E	554	565	Right-handed alpha
Helix 46	AF1	F	214	218	Right-handed 310
Helix 47	AF2	F	229	236	Right-handed alpha
Helix 48	AF3	F	253	266	Right-handed alpha
Helix 49	AF4	F	281	296	Right-handed alpha
Helix 50	AF5	F	317	322	Right-handed alpha
Helix 51	AF6	F	323	338	Right-handed alpha
Helix 52	AF7	F	350	359	Right-handed alpha
Helix 53	AF8	F	378	386	Right-handed alpha
Helix 54	AF9	F	405	408	Right-handed 310
Helix 55	AG1	F	417	421	Right-handed 310
Helix 56	AG2	F	428	435	Right-handed alpha
Helix 57	AG3	F	451	456	Right-handed alpha
Helix 58	AG4	F	456	475	Right-handed alpha
Helix 59	AG5	F	476	483	Right-handed alpha
Helix 60	AG6	F	484	488	Right-handed 310
Helix 61	AG7	F	489	506	Right-handed alpha
Helix 62	AG8	F	513	517	Right-handed 310
Helix 63	AG9	F	525	538	Right-handed alpha
Helix 64	AH1	F	545	550	Right-handed 310
Helix 65	AH2	F	555	565	Right-handed alpha
Helix 66	AH3	G	27	62	Right-handed alpha
Helix 67	AH4	G	62	74	Right-handed alpha
Helix 68	AH5	G	74	80	Right-handed alpha
Helix 69	AH6	G	105	125	Right-handed alpha
Helix 70	AH7	G	134	141	Right-handed alpha
Helix 71	AH8	G	162	175	Right-handed alpha
Helix 72	AH9	G	206	211	Right-handed alpha
Helix 73	AI1	G	212	218	Right-handed 310
Helix 74	AI2	G	222	296	Right-handed alpha
Helix 75	AI3	H	121	125	Right-handed 310
Helix 76	AI4	H	126	144	Right-handed alpha
Helix 77	AI5	H	146	164	Right-handed alpha
Helix 78	AI6	I	10	25	Right-handed alpha
Helix 79	AI7	I	32	38	Right-handed alpha
Helix 80	AI8	J	38	43	Right-handed alpha
Helix 81	AI9	J	45	77	Right-handed alpha
Helix 82	AJ1	K	3	15	Right-handed alpha
Helix 83	AJ2	K	18	39	Right-handed alpha
Helix 84	AJ3	K	42	73	Right-handed alpha
Helix 85	AJ4	L	3	15	Right-handed alpha
Helix 86	AJ5	L	18	39	Right-handed alpha
Helix 87	AJ6	L	42	73	Right-handed alpha
Helix 88	AJ7	M	3	15	Right-handed alpha
Helix 89	AJ8	M	18	39	Right-handed alpha
Helix 90	AJ9	M	42	58	Right-handed alpha
Helix 91	AK1	M	58	73	Right-handed alpha
Helix 92	AK2	N	3	15	Right-handed alpha
Helix 93	AK3	N	18	39	Right-handed alpha
Helix 94	AK4	N	42	73	Right-handed alpha
Helix 95	AK5	O	3	13	Right-handed alpha
Helix 96	AK6	O	16	38	Right-handed alpha
Helix 97	AK7	O	42	73	Right-handed alpha
Helix 98	AK8	P	3	7	Right-handed alpha
Helix 99	AK9	P	8	15	Right-handed alpha
Helix 100	AL1	P	17	39	Right-handed alpha
Helix 101	AL2	P	43	73	Right-handed alpha
Helix 102	AL3	Q	3	15	Right-handed alpha
Helix 103	AL4	Q	18	39	Right-handed alpha
Helix 104	AL5	Q	42	73	Right-handed alpha
Helix 105	AL6	R	3	15	Right-handed alpha
Helix 106	AL7	R	18	38	Right-handed alpha
Helix 107	AL8	R	43	73	Right-handed alpha
Helix 108	AL9	S	13	28	Right-handed alpha
Helix 109	AM1	S	31	46	Right-handed alpha
Helix 110	AM2	S	48	56	Right-handed alpha
Helix 111	AM3	S	61	76	Right-handed alpha
Helix 112	AM4	S	81	93	Right-handed alpha
Helix 113	AM5	S	94	96	Right-handed 310
Helix 114	AM6	S	97	111	Right-handed alpha
Helix 115	AM7	S	112	114	Right-handed 310
Helix 116	AM8	S	127	143	Right-handed alpha
Helix 117	AM9	S	176	183	Right-handed alpha
Helix 118	AN1	T	17	36	Right-handed alpha
Helix 119	AN2	T	42	44	Right-handed 310
Helix 120	AN3	T	45	62	Right-handed alpha
Helix 121	AN4	T	69	96	Right-handed alpha
Helix 122	AN5	U	8	45	Right-handed alpha
Helix 123	AN6	V	43	49	Right-handed alpha
Helix 124	AN7	V	49	54	Right-handed alpha
Helix 125	AN8	V	56	72	Right-handed alpha
Helix 126	AN9	V	79	144	Right-handed alpha
Helix 127	AO1	V	146	209	Right-handed alpha
Helix 128	AO2	V	210	234	Right-handed alpha
Helix 129	AO3	W	116	123	Right-handed alpha
Helix 130	AO4	W	131	147	Right-handed alpha
Helix 131	AO5	W	154	172	Right-handed alpha
Helix 132	AO6	W	172	180	Right-handed alpha
Helix 133	AO7	a	4	8	Right-handed 310
Helix 134	AO8	a	19	26	Right-handed alpha
Helix 135	AO9	a	27	29	Right-handed 310
Helix 136	AP1	a	40	58	Right-handed alpha
Helix 137	AP2	a	64	67	Right-handed 310
Helix 138	AP3	a	68	86	Right-handed alpha
Helix 139	AP4	a	93	96	Right-handed 310
Helix 140	AP5	a	97	120	Right-handed alpha
Helix 141	AP6	a	120	127	Right-handed alpha
Helix 142	AP7	a	137	151	Right-handed alpha
Helix 143	AP8	a	151	181	Right-handed alpha
Helix 144	AP9	a	188	223	Right-handed alpha
Helix 145	AQ1	c	9	23	Right-handed alpha
Helix 146	AQ2	c	34	51	Right-handed alpha
Helix 147	AQ3	d	12	17	Right-handed alpha
Helix 148	AQ4	d	24	45	Right-handed alpha
Helix 149	AQ5	d	53	61	Right-handed alpha
Helix 150	AQ6	d	64	75	Right-handed alpha
Helix 151	AQ7	d	86	124	Right-handed alpha
Helix 152	AQ8	d	132	140	Right-handed alpha
Helix 153	AQ9	i	10	13	Right-handed 310
Helix 154	AR1	i	14	21	Right-handed alpha
Helix 155	AR2	i	28	49	Right-handed alpha
Helix 156	AR3	k	8	29	Right-handed alpha
Helix 157	AR4	A	51	60	Right-handed alpha
Helix 158	AR5	A	121	125	Right-handed 310
Helix 159	AR6	A	193	198	Right-handed alpha
Helix 160	AR7	A	217	229	Right-handed alpha
Helix 161	AR8	A	229	234	Right-handed alpha
Helix 162	AR9	A	252	266	Right-handed alpha
Helix 163	AS1	A	268	270	Right-handed 310
Helix 164	AS2	A	282	302	Right-handed alpha
Helix 165	AS3	A	313	328	Right-handed alpha
Helix 166	AS4	A	333	337	Right-handed 310
Helix 167	AS5	A	341	349	Right-handed alpha
Helix 168	AS6	A	356	360	Right-handed 310
Helix 169	AS7	A	379	387	Right-handed alpha
Helix 170	AS8	A	417	422	Right-handed 310
Helix 171	AS9	A	423	442	Right-handed alpha
Helix 172	AT1	A	443	448	Right-handed 310
Helix 173	AT2	A	454	471	Right-handed alpha
Helix 174	AT3	A	480	493	Right-handed alpha
Helix 175	AT4	A	500	502	Right-handed 310
Helix 176	AT5	A	503	518	Right-handed alpha
Helix 177	AT6	A	519	530	Right-handed alpha
Helix 178	AT7	A	533	552	Right-handed alpha
Helix 179	AT8	C	53	61	Right-handed alpha
Helix 180	AT9	C	193	198	Right-handed alpha
Helix 181	AU1	C	217	229	Right-handed alpha
Helix 182	AU2	C	229	234	Right-handed alpha
Helix 183	AU3	C	237	241	Right-handed 310
Helix 184	AU4	C	252	265	Right-handed alpha
Helix 185	AU5	C	266	267	Right-handed 310
Helix 186	AU6	C	268	270	Right-handed 310
Helix 187	AU7	C	282	302	Right-handed alpha
Helix 188	AU8	C	314	327	Right-handed alpha
Helix 189	AU9	C	333	337	Right-handed 310
Helix 190	AV1	C	340	350	Right-handed alpha
Helix 191	AV2	C	379	387	Right-handed alpha
Helix 192	AV3	C	396	402	Right-handed alpha
Helix 193	AV4	C	423	442	Right-handed alpha
Helix 194	AV5	C	456	471	Right-handed alpha
Helix 195	AV6	C	480	493	Right-handed alpha
Helix 196	AV7	C	500	502	Right-handed 310
Helix 197	AV8	C	503	519	Right-handed alpha
Helix 198	AV9	C	519	530	Right-handed alpha
Helix 199	AW1	C	533	552	Right-handed alpha
Helix 200	AW2	B	121	125	Right-handed 310
Helix 201	AW3	B	193	200	Right-handed alpha
Helix 202	AW4	B	217	229	Right-handed alpha
Helix 203	AW5	B	229	234	Right-handed alpha
Helix 204	AW6	B	252	266	Right-handed alpha
Helix 205	AW7	B	282	302	Right-handed alpha
Helix 206	AW8	B	313	328	Right-handed alpha
Helix 207	AW9	B	333	337	Right-handed 310
Helix 208	AX1	B	340	349	Right-handed alpha
Helix 209	AX2	B	356	360	Right-handed 310
Helix 210	AX3	B	379	387	Right-handed alpha
Helix 211	AX4	B	396	403	Right-handed alpha
Helix 212	AX5	B	423	445	Right-handed alpha
Helix 213	AX6	B	455	471	Right-handed alpha
Helix 214	AX7	B	480	493	Right-handed alpha
Helix 215	AX8	B	503	519	Right-handed alpha
Helix 216	AX9	B	520	530	Right-handed alpha
Helix 217	AY1	B	533	550	Right-handed alpha

There are 24 sheets in PDB entry 9BXU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	109	first strand
Strand 2	D	112	117	anti-parallel
Strand 3	D	149	154	anti-parallel
Strand 4	D	138	144	anti-parallel
Strand 5	D	127	130	anti-parallel
Strand 6	D	166	169	anti-parallel
Strand 7	D	102	109	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	178	first strand
Strand 2	D	204	207	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	307	312	parallel
Strand 3	D	272	278	parallel
Strand 4	D	342	348	parallel
Strand 5	D	395	403	parallel
Strand 6	D	243	248	parallel
Strand 7	D	423	426	parallel
Strand 8	D	446	447	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	238	239	anti-parallel

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There are 14 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	109	first strand
Strand 2	E	112	117	anti-parallel
Strand 3	E	149	154	anti-parallel
Strand 4	E	138	143	anti-parallel
Strand 5	E	127	130	anti-parallel
Strand 6	E	166	169	anti-parallel
Strand 7	E	102	109	anti-parallel
Strand 8	A	103	109	anti-parallel
Strand 9	A	114	118	anti-parallel
Strand 10	A	81	86	anti-parallel
Strand 11	A	71	78	anti-parallel
Strand 12	A	130	132	anti-parallel
Strand 13	A	95	97	anti-parallel
Strand 14	A	103	109	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	175	177	first strand
Strand 2	E	205	207	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	307	313	parallel
Strand 3	E	272	280	parallel
Strand 4	E	342	347	parallel
Strand 5	E	395	401	parallel
Strand 6	E	243	247	parallel
Strand 7	E	423	426	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	224	225	first strand
Strand 2	E	238	239	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	102	109	first strand
Strand 2	F	112	117	anti-parallel
Strand 3	F	149	154	anti-parallel
Strand 4	F	138	144	anti-parallel
Strand 5	F	127	130	anti-parallel
Strand 6	F	166	169	anti-parallel
Strand 7	F	102	109	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	178	first strand
Strand 2	F	204	207	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	187	first strand
Strand 2	F	308	312	parallel
Strand 3	F	272	278	parallel
Strand 4	F	342	348	parallel
Strand 5	F	395	403	parallel
Strand 6	F	243	248	parallel
Strand 7	F	423	426	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	195	203	first strand
Strand 2	G	183	192	anti-parallel
Strand 3	G	92	96	parallel
Strand 4	G	129	133	parallel
Strand 5	G	149	154	parallel
Strand 6	I	43	45	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	39	43	first strand
Strand 2	H	111	116	parallel
Strand 3	H	102	106	anti-parallel
Strand 4	H	76	79	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	69	70	first strand
Strand 2	H	57	59	anti-parallel
Strand 3	H	83	88	anti-parallel
Strand 4	H	94	99	anti-parallel

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There are 11 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	149	154	first strand
Strand 2	S	117	122	parallel
Strand 3	S	161	166	anti-parallel
Strand 4	S	169	174	anti-parallel
Strand 5	C	69	78	anti-parallel
Strand 6	C	130	137	anti-parallel
Strand 7	C	94	97	anti-parallel
Strand 8	C	103	109	anti-parallel
Strand 9	C	114	118	anti-parallel
Strand 10	C	81	85	anti-parallel
Strand 11	C	69	78	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	36	37	first strand
Strand 2	V	41	42	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	141	first strand
Strand 2	A	169	171	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	151	first strand
Strand 2	A	272	277	parallel
Strand 3	A	243	249	parallel
Strand 4	A	307	312	parallel
Strand 5	A	365	371	parallel
Strand 6	A	209	212	parallel
Strand 7	A	391	394	parallel
Strand 8	A	414	415	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	139	142	first strand
Strand 2	C	168	171	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	151	first strand
Strand 2	C	272	277	parallel
Strand 3	C	243	249	parallel
Strand 4	C	306	312	parallel
Strand 5	C	363	371	parallel
Strand 6	C	209	212	parallel
Strand 7	C	391	394	parallel
Strand 8	C	414	415	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	78	first strand
Strand 2	B	81	86	anti-parallel
Strand 3	B	114	118	anti-parallel
Strand 4	B	103	109	anti-parallel
Strand 5	B	94	97	anti-parallel
Strand 6	B	130	137	anti-parallel
Strand 7	B	71	78	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	142	first strand
Strand 2	B	168	171	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	151	first strand
Strand 2	B	272	277	parallel
Strand 3	B	243	249	parallel
Strand 4	B	306	311	parallel
Strand 5	B	363	366	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	371	first strand
Strand 2	B	209	212	parallel
Strand 3	B	391	394	parallel
Strand 4	B	414	415	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9BXU

Analysis of interatomic Contacts of Structural Units in PDB entry:
9BXU