Analysis of interatomic Contacts of Structural Units in PDB entry:
9C0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C0M entry

There is 1 chain in PDB entry 9C0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5GLU 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 9C0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 30Right-handed 310
Helix 2
AA2
A
31 41Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
64 83Right-handed alpha
Helix 5
AA5
A
93 104Right-handed alpha
Helix 6
AA6
A
124 141Right-handed alpha
Helix 7
AA7
A
144 153Right-handed alpha
Helix 8
AA8
A
157 173Right-handed alpha
Helix 9
AA9
A
174 178Right-handed 310
Helix 10
AB1
A
196 205Right-handed alpha
Helix 11
AB2
A
221 225Right-handed 310
Helix 12
AB3
A
227 241Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9C0M.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
17 21parallel
Strand 4
A
87 92parallel
Strand 5
A
110 114parallel
Strand 6
A
182 187parallel
Strand 7
A
210 215parallel
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