Analysis of interatomic Contacts of Structural Units in PDB entry:
9C19


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C19 entry

There are 6 chains in PDB entry 9C19 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LEU 74ALA 365
A
 GLY 64LYS 368
B
 LEU 66ALA 365
F
 SER 105LYS 107
D
 LEU 48ILE 171
E
 LEU 48GLU 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9C19. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
90 100Right-handed alpha
Helix 2
AA2
C
105 110Right-handed alpha
Helix 3
AA3
C
113 119Right-handed alpha
Helix 4
AA4
C
158 170Right-handed alpha
Helix 5
AA5
C
189 204Right-handed alpha
Helix 6
AA6
C
215 218Right-handed 310
Helix 7
AA7
C
219 228Right-handed alpha
Helix 8
AA8
C
241 243Right-handed 310
Helix 9
AA9
C
244 249Right-handed alpha
Helix 10
AB1
C
254 269Right-handed alpha
Helix 11
AB2
C
285 299Right-handed alpha
Helix 12
AB3
C
324 339Right-handed alpha
Helix 13
AB4
C
354 363Right-handed alpha
Helix 14
AB5
A
77 81Right-handed 310
Helix 15
AB6
A
87 100Right-handed alpha
Helix 16
AB7
A
105 109Right-handed alpha
Helix 17
AB8
A
113 120Right-handed alpha
Helix 18
AB9
A
158 171Right-handed alpha
Helix 19
AC1
A
189 204Right-handed alpha
Helix 20
AC2
A
215 218Right-handed 310
Helix 21
AC3
A
219 228Right-handed alpha
Helix 22
AC4
A
241 243Right-handed 310
Helix 23
AC5
A
244 249Right-handed alpha
Helix 24
AC6
A
254 269Right-handed alpha
Helix 25
AC7
A
285 299Right-handed alpha
Helix 26
AC8
A
324 339Right-handed alpha
Helix 27
AC9
A
354 368Right-handed alpha
Helix 28
AD1
B
77 81Right-handed 310
Helix 29
AD2
B
87 100Right-handed alpha
Helix 30
AD3
B
105 109Right-handed alpha
Helix 31
AD4
B
113 118Right-handed alpha
Helix 32
AD5
B
158 171Right-handed alpha
Helix 33
AD6
B
189 204Right-handed alpha
Helix 34
AD7
B
215 218Right-handed 310
Helix 35
AD8
B
219 228Right-handed alpha
Helix 36
AD9
B
241 243Right-handed 310
Helix 37
AE1
B
244 249Right-handed alpha
Helix 38
AE2
B
254 269Right-handed alpha
Helix 39
AE3
B
285 299Right-handed alpha
Helix 40
AE4
B
324 339Right-handed alpha
Helix 41
AE5
B
354 364Right-handed alpha
Helix 42
AE6
D
72 80Right-handed alpha
Helix 43
AE7
D
125 130Right-handed alpha
Helix 44
AE8
D
132 137Right-handed alpha
Helix 45
AE9
D
151 158Right-handed 310
Helix 46
AF1
D
160 170Right-handed alpha
Helix 47
AF2
E
72 80Right-handed alpha
Helix 48
AF3
E
125 130Right-handed alpha
Helix 49
AF4
E
132 137Right-handed alpha
Helix 50
AF5
E
151 158Right-handed 310
Helix 51
AF6
E
160 169Right-handed alpha
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There are 10 sheets in PDB entry 9C19. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 104first strand
Strand 2
C
129 132anti-parallel
Strand 3
C
174 179parallel
Strand 4
C
208 212parallel
Strand 5
C
233 235parallel
Strand 6
C
273 280parallel
Strand 7
C
303 308parallel
Strand 8
C
342 345parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 137first strand
Strand 2
C
147 148parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
130 132anti-parallel
Strand 3
A
174 179parallel
Strand 4
A
208 212parallel
Strand 5
A
233 235parallel
Strand 6
A
273 280parallel
Strand 7
A
303 308parallel
Strand 8
A
343 345parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
147 148parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 104first strand
Strand 2
B
130 132anti-parallel
Strand 3
B
174 179parallel
Strand 4
B
208 212parallel
Strand 5
B
233 235parallel
Strand 6
B
273 280parallel
Strand 7
B
303 308parallel
Strand 8
B
342 345parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 137first strand
Strand 2
B
147 148parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 53first strand
Strand 2
D
58 63anti-parallel
Strand 3
D
66 71anti-parallel
Strand 4
D
145 148anti-parallel
Strand 5
D
118 123anti-parallel
Strand 6
D
93 94anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 86first strand
Strand 2
D
99 105anti-parallel
Strand 3
D
109 113anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
52 53first strand
Strand 2
E
58 63anti-parallel
Strand 3
E
66 71anti-parallel
Strand 4
E
145 148anti-parallel
Strand 5
E
118 123anti-parallel
Strand 6
E
93 94anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
82 86first strand
Strand 2
E
99 105anti-parallel
Strand 3
E
109 113anti-parallel
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