Analysis of interatomic Contacts of Structural Units in PDB entry:
9C1U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C1U entry

There are 12 chains in PDB entry 9C1U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 371SER 396
B
 SER 371SER 396
C
 SER 371SER 396
D
 SER 371SER 396
E
 SER 371SER 396
F
 SER 371SER 396
G
 SER 371SER 396
H
 SER 371SER 396
I
 SER 371SER 396
J
 SER 371SER 396
K
 SER 371SER 396
L
 SER 371SER 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9C1U

There are 4 sheets in PDB entry 9C1U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
C
372 378parallel
Strand 3
E
372 378parallel
Strand 4
G
372 378parallel
Strand 5
I
372 378parallel
Strand 6
K
372 378parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 394first strand
Strand 2
C
389 394parallel
Strand 3
E
389 394parallel
Strand 4
G
389 394parallel
Strand 5
I
389 394parallel
Strand 6
K
389 394parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 378first strand
Strand 2
D
372 378parallel
Strand 3
F
372 378parallel
Strand 4
H
372 378parallel
Strand 5
J
372 378parallel
Strand 6
L
372 378parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
389 395first strand
Strand 2
D
389 395parallel
Strand 3
F
389 395parallel
Strand 4
H
389 395parallel
Strand 5
J
389 394parallel
Strand 6
L
389 394parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il