Analysis of interatomic Contacts of Structural Units in PDB entry:
9C1X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9C1X entry

There are 12 chains in PDB entry 9C1X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 436
B	MET 1	ILE 436
C	MET 1	ILE 436
D	MET 1	ILE 436
E	MET 1	ILE 436
F	MET 1	ILE 436
G	MET 1	ILE 436
H	MET 1	ILE 436
I	MET 1	ILE 436
J	MET 1	ILE 436
K	MET 1	ILE 436
L	MET 1	ILE 436

There are228 helices in PDB entry 9C1X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	27	Right-handed alpha
Helix 2	AA2	A	65	69	Right-handed 310
Helix 3	AA3	A	70	81	Right-handed alpha
Helix 4	AA4	A	107	116	Right-handed alpha
Helix 5	AA5	A	119	126	Right-handed alpha
Helix 6	AA6	A	126	131	Right-handed alpha
Helix 7	AA7	A	135	144	Right-handed alpha
Helix 8	AA8	A	148	162	Right-handed alpha
Helix 9	AA9	A	169	174	Right-handed alpha
Helix 10	AB1	A	185	188	Right-handed 310
Helix 11	AB2	A	189	198	Right-handed alpha
Helix 12	AB3	A	205	210	Right-handed alpha
Helix 13	AB4	A	210	222	Right-handed alpha
Helix 14	AB5	A	227	232	Right-handed 310
Helix 15	AB6	A	234	244	Right-handed alpha
Helix 16	AB7	A	266	272	Right-handed 310
Helix 17	AB8	A	297	310	Right-handed alpha
Helix 18	AB9	A	327	337	Right-handed alpha
Helix 19	AC1	A	338	342	Right-handed 310
Helix 20	AC2	A	355	361	Right-handed alpha
Helix 21	AC3	A	424	430	Right-handed alpha
Helix 22	AC4	B	3	27	Right-handed alpha
Helix 23	AC5	B	65	70	Right-handed 310
Helix 24	AC6	B	71	81	Right-handed alpha
Helix 25	AC7	B	107	116	Right-handed alpha
Helix 26	AC8	B	119	126	Right-handed alpha
Helix 27	AC9	B	126	131	Right-handed alpha
Helix 28	AD1	B	135	145	Right-handed alpha
Helix 29	AD2	B	148	161	Right-handed alpha
Helix 30	AD3	B	169	175	Right-handed alpha
Helix 31	AD4	B	185	198	Right-handed alpha
Helix 32	AD5	B	205	210	Right-handed alpha
Helix 33	AD6	B	210	222	Right-handed alpha
Helix 34	AD7	B	234	243	Right-handed alpha
Helix 35	AD8	B	297	307	Right-handed alpha
Helix 36	AD9	B	328	336	Right-handed alpha
Helix 37	AE1	B	422	431	Right-handed alpha
Helix 38	AE2	C	3	27	Right-handed alpha
Helix 39	AE3	C	65	70	Right-handed 310
Helix 40	AE4	C	71	81	Right-handed alpha
Helix 41	AE5	C	107	116	Right-handed alpha
Helix 42	AE6	C	119	126	Right-handed alpha
Helix 43	AE7	C	126	131	Right-handed alpha
Helix 44	AE8	C	135	143	Right-handed alpha
Helix 45	AE9	C	148	162	Right-handed alpha
Helix 46	AF1	C	169	174	Right-handed alpha
Helix 47	AF2	C	185	197	Right-handed alpha
Helix 48	AF3	C	205	210	Right-handed alpha
Helix 49	AF4	C	211	219	Right-handed alpha
Helix 50	AF5	C	228	232	Right-handed 310
Helix 51	AF6	C	234	243	Right-handed alpha
Helix 52	AF7	C	268	272	Right-handed 310
Helix 53	AF8	C	296	307	Right-handed alpha
Helix 54	AF9	C	329	341	Right-handed alpha
Helix 55	AG1	C	422	430	Right-handed alpha
Helix 56	AG2	D	3	27	Right-handed alpha
Helix 57	AG3	D	65	70	Right-handed 310
Helix 58	AG4	D	71	81	Right-handed alpha
Helix 59	AG5	D	107	116	Right-handed alpha
Helix 60	AG6	D	119	126	Right-handed alpha
Helix 61	AG7	D	126	131	Right-handed alpha
Helix 62	AG8	D	135	145	Right-handed alpha
Helix 63	AG9	D	148	162	Right-handed alpha
Helix 64	AH1	D	169	175	Right-handed alpha
Helix 65	AH2	D	188	198	Right-handed alpha
Helix 66	AH3	D	205	210	Right-handed alpha
Helix 67	AH4	D	210	222	Right-handed alpha
Helix 68	AH5	D	228	232	Right-handed 310
Helix 69	AH6	D	234	244	Right-handed alpha
Helix 70	AH7	D	264	269	Right-handed 310
Helix 71	AH8	D	271	276	Right-handed alpha
Helix 72	AH9	D	299	310	Right-handed alpha
Helix 73	AI1	D	330	341	Right-handed alpha
Helix 74	AI2	D	382	386	Right-handed 310
Helix 75	AI3	D	422	424	Right-handed 310
Helix 76	AI4	D	425	430	Right-handed alpha
Helix 77	AI5	E	3	27	Right-handed alpha
Helix 78	AI6	E	65	70	Right-handed 310
Helix 79	AI7	E	71	81	Right-handed alpha
Helix 80	AI8	E	107	116	Right-handed alpha
Helix 81	AI9	E	119	126	Right-handed alpha
Helix 82	AJ1	E	126	131	Right-handed alpha
Helix 83	AJ2	E	135	144	Right-handed alpha
Helix 84	AJ3	E	148	162	Right-handed alpha
Helix 85	AJ4	E	169	174	Right-handed alpha
Helix 86	AJ5	E	185	198	Right-handed alpha
Helix 87	AJ6	E	205	210	Right-handed alpha
Helix 88	AJ7	E	210	222	Right-handed alpha
Helix 89	AJ8	E	234	244	Right-handed alpha
Helix 90	AJ9	E	287	291	Right-handed 310
Helix 91	AK1	E	298	310	Right-handed alpha
Helix 92	AK2	E	329	341	Right-handed alpha
Helix 93	AK3	E	356	361	Right-handed alpha
Helix 94	AK4	E	422	430	Right-handed alpha
Helix 95	AK5	F	3	27	Right-handed alpha
Helix 96	AK6	F	65	70	Right-handed 310
Helix 97	AK7	F	71	81	Right-handed alpha
Helix 98	AK8	F	107	116	Right-handed alpha
Helix 99	AK9	F	119	126	Right-handed alpha
Helix 100	AL1	F	126	131	Right-handed alpha
Helix 101	AL2	F	135	144	Right-handed alpha
Helix 102	AL3	F	148	162	Right-handed alpha
Helix 103	AL4	F	169	174	Right-handed alpha
Helix 104	AL5	F	189	198	Right-handed alpha
Helix 105	AL6	F	205	210	Right-handed alpha
Helix 106	AL7	F	211	222	Right-handed alpha
Helix 107	AL8	F	227	232	Right-handed 310
Helix 108	AL9	F	234	244	Right-handed alpha
Helix 109	AM1	F	268	272	Right-handed 310
Helix 110	AM2	F	296	310	Right-handed alpha
Helix 111	AM3	F	328	336	Right-handed alpha
Helix 112	AM4	F	357	361	Right-handed 310
Helix 113	AM5	F	422	430	Right-handed alpha
Helix 114	AM6	G	3	27	Right-handed alpha
Helix 115	AM7	G	65	70	Right-handed 310
Helix 116	AM8	G	71	81	Right-handed alpha
Helix 117	AM9	G	107	116	Right-handed alpha
Helix 118	AN1	G	119	126	Right-handed alpha
Helix 119	AN2	G	126	131	Right-handed alpha
Helix 120	AN3	G	135	144	Right-handed alpha
Helix 121	AN4	G	148	162	Right-handed alpha
Helix 122	AN5	G	169	175	Right-handed alpha
Helix 123	AN6	G	185	197	Right-handed alpha
Helix 124	AN7	G	203	210	Right-handed alpha
Helix 125	AN8	G	210	221	Right-handed alpha
Helix 126	AN9	G	228	232	Right-handed 310
Helix 127	AO1	G	234	244	Right-handed alpha
Helix 128	AO2	G	265	269	Right-handed 310
Helix 129	AO3	G	272	277	Right-handed alpha
Helix 130	AO4	G	299	310	Right-handed alpha
Helix 131	AO5	G	330	339	Right-handed alpha
Helix 132	AO6	G	355	359	Right-handed 310
Helix 133	AO7	G	423	430	Right-handed alpha
Helix 134	AO8	H	3	27	Right-handed alpha
Helix 135	AO9	H	65	70	Right-handed 310
Helix 136	AP1	H	71	81	Right-handed alpha
Helix 137	AP2	H	107	116	Right-handed alpha
Helix 138	AP3	H	119	126	Right-handed alpha
Helix 139	AP4	H	126	131	Right-handed alpha
Helix 140	AP5	H	135	144	Right-handed alpha
Helix 141	AP6	H	148	162	Right-handed alpha
Helix 142	AP7	H	169	175	Right-handed alpha
Helix 143	AP8	H	185	198	Right-handed alpha
Helix 144	AP9	H	204	210	Right-handed alpha
Helix 145	AQ1	H	210	222	Right-handed alpha
Helix 146	AQ2	H	234	244	Right-handed alpha
Helix 147	AQ3	H	271	276	Right-handed alpha
Helix 148	AQ4	H	299	310	Right-handed alpha
Helix 149	AQ5	H	330	335	Right-handed alpha
Helix 150	AQ6	H	335	340	Right-handed alpha
Helix 151	AQ7	H	382	386	Right-handed 310
Helix 152	AQ8	H	422	427	Right-handed 310
Helix 153	AQ9	I	3	27	Right-handed alpha
Helix 154	AR1	I	65	69	Right-handed 310
Helix 155	AR2	I	70	81	Right-handed alpha
Helix 156	AR3	I	107	116	Right-handed alpha
Helix 157	AR4	I	119	126	Right-handed alpha
Helix 158	AR5	I	126	131	Right-handed alpha
Helix 159	AR6	I	135	144	Right-handed alpha
Helix 160	AR7	I	148	162	Right-handed alpha
Helix 161	AR8	I	169	174	Right-handed alpha
Helix 162	AR9	I	185	198	Right-handed alpha
Helix 163	AS1	I	204	210	Right-handed alpha
Helix 164	AS2	I	210	222	Right-handed alpha
Helix 165	AS3	I	228	232	Right-handed 310
Helix 166	AS4	I	234	244	Right-handed alpha
Helix 167	AS5	I	297	307	Right-handed alpha
Helix 168	AS6	I	329	332	Right-handed 310
Helix 169	AS7	I	333	338	Right-handed alpha
Helix 170	AS8	I	356	361	Right-handed alpha
Helix 171	AS9	I	422	430	Right-handed alpha
Helix 172	AT1	J	3	27	Right-handed alpha
Helix 173	AT2	J	65	70	Right-handed 310
Helix 174	AT3	J	71	81	Right-handed alpha
Helix 175	AT4	J	107	116	Right-handed alpha
Helix 176	AT5	J	119	126	Right-handed alpha
Helix 177	AT6	J	126	131	Right-handed alpha
Helix 178	AT7	J	135	144	Right-handed alpha
Helix 179	AT8	J	148	161	Right-handed alpha
Helix 180	AT9	J	169	176	Right-handed alpha
Helix 181	AU1	J	185	198	Right-handed alpha
Helix 182	AU2	J	205	210	Right-handed alpha
Helix 183	AU3	J	210	222	Right-handed alpha
Helix 184	AU4	J	227	232	Right-handed 310
Helix 185	AU5	J	234	244	Right-handed alpha
Helix 186	AU6	J	266	271	Right-handed alpha
Helix 187	AU7	J	296	309	Right-handed alpha
Helix 188	AU8	J	331	336	Right-handed alpha
Helix 189	AU9	J	391	395	Right-handed 310
Helix 190	AV1	J	422	430	Right-handed alpha
Helix 191	AV2	K	3	27	Right-handed alpha
Helix 192	AV3	K	65	70	Right-handed 310
Helix 193	AV4	K	71	80	Right-handed alpha
Helix 194	AV5	K	107	116	Right-handed alpha
Helix 195	AV6	K	119	126	Right-handed alpha
Helix 196	AV7	K	126	131	Right-handed alpha
Helix 197	AV8	K	135	144	Right-handed alpha
Helix 198	AV9	K	148	162	Right-handed alpha
Helix 199	AW1	K	169	175	Right-handed alpha
Helix 200	AW2	K	185	198	Right-handed alpha
Helix 201	AW3	K	205	210	Right-handed alpha
Helix 202	AW4	K	210	223	Right-handed alpha
Helix 203	AW5	K	228	232	Right-handed 310
Helix 204	AW6	K	234	244	Right-handed alpha
Helix 205	AW7	K	297	307	Right-handed alpha
Helix 206	AW8	K	329	339	Right-handed alpha
Helix 207	AW9	K	356	360	Right-handed 310
Helix 208	AX1	K	422	430	Right-handed alpha
Helix 209	AX2	L	3	27	Right-handed alpha
Helix 210	AX3	L	65	70	Right-handed 310
Helix 211	AX4	L	71	81	Right-handed alpha
Helix 212	AX5	L	107	116	Right-handed alpha
Helix 213	AX6	L	119	126	Right-handed alpha
Helix 214	AX7	L	126	131	Right-handed alpha
Helix 215	AX8	L	135	144	Right-handed alpha
Helix 216	AX9	L	148	162	Right-handed alpha
Helix 217	AY1	L	169	174	Right-handed alpha
Helix 218	AY2	L	185	198	Right-handed alpha
Helix 219	AY3	L	205	210	Right-handed alpha
Helix 220	AY4	L	210	222	Right-handed alpha
Helix 221	AY5	L	227	232	Right-handed 310
Helix 222	AY6	L	234	244	Right-handed alpha
Helix 223	AY7	L	268	272	Right-handed 310
Helix 224	AY8	L	287	291	Right-handed 310
Helix 225	AY9	L	296	306	Right-handed alpha
Helix 226	AZ1	L	330	336	Right-handed alpha
Helix 227	AZ2	L	356	361	Right-handed alpha
Helix 228	AZ3	L	422	430	Right-handed alpha

There are 33 sheets in PDB entry 9C1X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	179	180	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	283	285	first strand
Strand 2	A	397	399	parallel
Strand 3	A	415	416	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	324	first strand
Strand 2	A	379	380	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	A	371	372	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	92	first strand
Strand 2	B	179	180	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	283	286	first strand
Strand 2	B	321	324	parallel
Strand 3	B	376	379	parallel
Strand 4	B	345	346	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	94	first strand
Strand 2	C	181	182	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	285	first strand
Strand 2	C	397	399	parallel
Strand 3	C	415	417	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	322	324	first strand
Strand 2	C	378	380	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	92	first strand
Strand 2	D	179	180	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	365	366	first strand
Strand 2	D	371	372	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	282	285	first strand
Strand 2	E	396	400	parallel
Strand 3	E	415	418	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	345	348	first strand
Strand 2	E	376	378	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	92	first strand
Strand 2	F	179	180	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	323	324	first strand
Strand 2	F	283	286	parallel
Strand 3	F	396	399	parallel
Strand 4	F	414	417	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	345	346	first strand
Strand 2	F	376	377	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	365	366	first strand
Strand 2	F	371	372	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	92	first strand
Strand 2	G	179	180	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	365	366	first strand
Strand 2	G	371	372	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	91	92	first strand
Strand 2	H	179	180	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	285	286	first strand
Strand 2	H	399	400	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	322	324	first strand
Strand 2	H	378	380	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	365	366	first strand
Strand 2	H	371	372	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	92	93	first strand
Strand 2	I	180	181	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	283	286	first strand
Strand 2	I	321	324	parallel
Strand 3	I	377	378	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	365	366	first strand
Strand 2	I	371	372	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	284	286	first strand
Strand 2	J	322	324	parallel
Strand 3	J	376	379	parallel
Strand 4	J	345	346	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	398	399	first strand
Strand 2	J	416	417	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	283	284	first strand
Strand 2	K	321	323	parallel
Strand 3	K	376	379	parallel
Strand 4	K	345	346	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	365	366	first strand
Strand 2	K	371	372	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	396	399	first strand
Strand 2	K	414	417	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	285	286	first strand
Strand 2	L	322	324	parallel
Strand 3	L	376	379	parallel
Strand 4	L	345	346	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	397	398	first strand
Strand 2	L	415	416	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9C1X

Analysis of interatomic Contacts of Structural Units in PDB entry:
9C1X