Analysis of interatomic Contacts of Structural Units in PDB entry:
9C60

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9C60 entry

There are 4 chains in PDB entry 9C60 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	SER 834
B	THR 33	LEU 843
C	THR 33	PHE 836
D	THR 33	GLU 841

There are110 helices in PDB entry 9C60. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	101	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	167	Right-handed alpha
Helix 5	AA5	A	179	185	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	190	195	Right-handed alpha
Helix 8	AA8	A	211	221	Right-handed alpha
Helix 9	AA9	A	231	244	Right-handed alpha
Helix 10	AB1	A	266	271	Right-handed alpha
Helix 11	AB2	A	286	300	Right-handed alpha
Helix 12	AB3	A	317	336	Right-handed alpha
Helix 13	AB4	A	356	365	Right-handed alpha
Helix 14	AB5	A	461	475	Right-handed alpha
Helix 15	AB6	A	520	525	Right-handed alpha
Helix 16	AB7	A	560	582	Right-handed alpha
Helix 17	AB8	A	632	665	Right-handed alpha
Helix 18	AB9	A	672	677	Right-handed alpha
Helix 19	AC1	A	690	696	Right-handed alpha
Helix 20	AC2	A	699	712	Right-handed alpha
Helix 21	AC3	A	720	730	Right-handed alpha
Helix 22	AC4	A	739	749	Right-handed alpha
Helix 23	AC5	A	774	789	Right-handed alpha
Helix 24	AC6	A	789	802	Right-handed alpha
Helix 25	AC7	A	821	834	Right-handed alpha
Helix 26	AC8	B	51	67	Right-handed alpha
Helix 27	AC9	B	87	101	Right-handed alpha
Helix 28	AD1	B	111	126	Right-handed alpha
Helix 29	AD2	B	152	167	Right-handed alpha
Helix 30	AD3	B	179	185	Right-handed alpha
Helix 31	AD4	B	185	190	Right-handed alpha
Helix 32	AD5	B	190	195	Right-handed alpha
Helix 33	AD6	B	211	221	Right-handed alpha
Helix 34	AD7	B	231	244	Right-handed alpha
Helix 35	AD8	B	260	264	Right-handed 310
Helix 36	AD9	B	286	300	Right-handed alpha
Helix 37	AE1	B	317	336	Right-handed alpha
Helix 38	AE2	B	355	365	Right-handed alpha
Helix 39	AE3	B	461	474	Right-handed alpha
Helix 40	AE4	B	501	507	Right-handed alpha
Helix 41	AE5	B	520	525	Right-handed alpha
Helix 42	AE6	B	551	557	Right-handed alpha
Helix 43	AE7	B	560	584	Right-handed alpha
Helix 44	AE8	B	634	662	Right-handed alpha
Helix 45	AE9	B	670	677	Right-handed alpha
Helix 46	AF1	B	688	695	Right-handed alpha
Helix 47	AF2	B	699	712	Right-handed alpha
Helix 48	AF3	B	720	731	Right-handed alpha
Helix 49	AF4	B	739	749	Right-handed alpha
Helix 50	AF5	B	774	788	Right-handed alpha
Helix 51	AF6	B	789	799	Right-handed alpha
Helix 52	AF7	B	821	842	Right-handed alpha
Helix 53	AF8	C	51	67	Right-handed alpha
Helix 54	AF9	C	87	101	Right-handed alpha
Helix 55	AG1	C	113	125	Right-handed alpha
Helix 56	AG2	C	152	167	Right-handed alpha
Helix 57	AG3	C	180	185	Right-handed alpha
Helix 58	AG4	C	185	195	Right-handed alpha
Helix 59	AG5	C	211	222	Right-handed alpha
Helix 60	AG6	C	231	244	Right-handed alpha
Helix 61	AG7	C	260	264	Right-handed 310
Helix 62	AG8	C	266	271	Right-handed alpha
Helix 63	AG9	C	286	300	Right-handed alpha
Helix 64	AH1	C	306	310	Right-handed 310
Helix 65	AH2	C	317	335	Right-handed alpha
Helix 66	AH3	C	355	366	Right-handed alpha
Helix 67	AH4	C	454	457	Right-handed 310
Helix 68	AH5	C	462	474	Right-handed alpha
Helix 69	AH6	C	499	507	Right-handed alpha
Helix 70	AH7	C	520	527	Right-handed alpha
Helix 71	AH8	C	553	557	Right-handed 310
Helix 72	AH9	C	560	584	Right-handed alpha
Helix 73	AI1	C	631	665	Right-handed alpha
Helix 74	AI2	C	670	677	Right-handed alpha
Helix 75	AI3	C	691	696	Right-handed alpha
Helix 76	AI4	C	699	712	Right-handed alpha
Helix 77	AI5	C	720	731	Right-handed alpha
Helix 78	AI6	C	739	749	Right-handed alpha
Helix 79	AI7	C	773	789	Right-handed alpha
Helix 80	AI8	C	789	800	Right-handed alpha
Helix 81	AI9	C	822	836	Right-handed alpha
Helix 82	AJ1	D	51	67	Right-handed alpha
Helix 83	AJ2	D	87	101	Right-handed alpha
Helix 84	AJ3	D	111	126	Right-handed alpha
Helix 85	AJ4	D	152	168	Right-handed alpha
Helix 86	AJ5	D	178	182	Right-handed 310
Helix 87	AJ6	D	185	195	Right-handed alpha
Helix 88	AJ7	D	211	221	Right-handed alpha
Helix 89	AJ8	D	231	245	Right-handed alpha
Helix 90	AJ9	D	260	264	Right-handed 310
Helix 91	AK1	D	269	273	Right-handed 310
Helix 92	AK2	D	286	301	Right-handed alpha
Helix 93	AK3	D	306	310	Right-handed 310
Helix 94	AK4	D	317	336	Right-handed alpha
Helix 95	AK5	D	355	366	Right-handed alpha
Helix 96	AK6	D	455	459	Right-handed 310
Helix 97	AK7	D	462	474	Right-handed alpha
Helix 98	AK8	D	500	505	Right-handed 310
Helix 99	AK9	D	520	527	Right-handed alpha
Helix 100	AL1	D	553	557	Right-handed 310
Helix 101	AL2	D	560	580	Right-handed alpha
Helix 102	AL3	D	634	665	Right-handed alpha
Helix 103	AL4	D	688	696	Right-handed alpha
Helix 104	AL5	D	699	712	Right-handed alpha
Helix 105	AL6	D	712	717	Right-handed alpha
Helix 106	AL7	D	720	731	Right-handed alpha
Helix 107	AL8	D	739	749	Right-handed alpha
Helix 108	AL9	D	773	787	Right-handed alpha
Helix 109	AM1	D	790	801	Right-handed alpha
Helix 110	AM2	D	816	841	Right-handed alpha

There are 33 sheets in PDB entry 9C60. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	83	first strand
Strand 2	A	37	43	parallel
Strand 3	A	105	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	151	parallel
Strand 6	A	383	384	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	203	first strand
Strand 2	A	172	176	parallel
Strand 3	A	225	229	parallel
Strand 4	A	253	256	parallel
Strand 5	A	275	278	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	373	375	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	394	first strand
Strand 2	A	399	406	anti-parallel
Strand 3	A	410	413	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	436	first strand
Strand 2	A	480	481	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	491	492	first strand
Strand 2	A	497	498	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	536	first strand
Strand 2	A	762	763	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	738	first strand
Strand 2	A	538	543	anti-parallel
Strand 3	A	752	755	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	43	first strand
Strand 2	B	75	83	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	129	131	parallel
Strand 3	B	146	148	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	174	176	parallel
Strand 3	B	225	229	parallel
Strand 4	B	253	256	parallel
Strand 5	B	275	278	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	395	first strand
Strand 2	B	398	401	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	406	first strand
Strand 2	B	410	411	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	437	first strand
Strand 2	B	478	482	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	527	529	first strand
Strand 2	B	767	769	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	738	first strand
Strand 2	B	538	543	anti-parallel
Strand 3	B	752	755	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	684	685	first strand
Strand 2	B	717	718	parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	83	first strand
Strand 2	C	35	43	parallel
Strand 3	C	106	107	parallel
Strand 4	C	129	131	parallel
Strand 5	C	146	151	parallel
Strand 6	C	383	384	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	199	first strand
Strand 2	C	171	176	parallel
Strand 3	C	202	203	parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	199	first strand
Strand 2	C	171	176	parallel
Strand 3	C	225	229	parallel
Strand 4	C	253	256	parallel
Strand 5	C	277	280	parallel
Strand 6	C	389	393	anti-parallel
Strand 7	C	400	406	anti-parallel
Strand 8	C	410	412	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	370	first strand
Strand 2	C	373	375	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	435	first strand
Strand 2	C	478	480	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	446	first strand
Strand 2	C	459	461	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	514	515	first strand
Strand 2	C	765	766	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	683	first strand
Strand 2	C	733	738	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	752	754	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	83	first strand
Strand 2	D	34	43	parallel
Strand 3	D	106	107	parallel
Strand 4	D	129	131	parallel
Strand 5	D	147	151	parallel
Strand 6	D	383	384	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	203	first strand
Strand 2	D	173	176	parallel
Strand 3	D	225	229	parallel
Strand 4	D	253	256	parallel
Strand 5	D	275	280	parallel
Strand 6	D	389	395	anti-parallel
Strand 7	D	398	405	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	367	370	first strand
Strand 2	D	373	376	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	478	482	first strand
Strand 2	D	433	437	parallel
Strand 3	D	512	513	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	444	445	first strand
Strand 2	D	460	461	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	536	first strand
Strand 2	D	762	764	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	684	first strand
Strand 2	D	733	738	parallel
Strand 3	D	538	542	anti-parallel
Strand 4	D	753	754	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9C60

Analysis of interatomic Contacts of Structural Units in PDB entry:
9C60