Analysis of interatomic Contacts of Structural Units in PDB entry:
9C68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C68 entry

There are 3 chains in PDB entry 9C68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 163
B
 SER 2PRO 168
C
 A 1 A 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 9C68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 21Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
76 89Right-handed alpha
Helix 4
AA4
A
103 118Right-handed alpha
Helix 5
AA5
A
133 143Right-handed alpha
Helix 6
AA6
B
14 21Right-handed alpha
Helix 7
AA7
B
42 51Right-handed alpha
Helix 8
AA8
B
70 89Right-handed alpha
Helix 9
AA9
B
103 118Right-handed alpha
Helix 10
AB1
B
133 143Right-handed alpha
Helix 11
AB2
B
157 162Right-handed alpha
Helix 12
AB3
B
163 167Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 9C68. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 61first strand
Strand 2
A
29 34parallel
Strand 3
A
4 8parallel
Strand 4
A
96 98parallel
Strand 5
A
121 127parallel
Strand 6
A
146 150anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 62first strand
Strand 2
B
29 35parallel
Strand 3
B
4 8parallel
Strand 4
B
96 98parallel
Strand 5
B
119 127parallel
Strand 6
B
146 154anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il