Analysis of interatomic Contacts of Structural Units in PDB entry:
9C6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C6A entry

There are 4 chains in PDB entry 9C6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ILE 166
B
 MET 1ILE 166
C
 MET 1ILE 166
D
 MET 1ILE 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9C6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 22Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
70 89Right-handed alpha
Helix 4
AA4
A
103 118Right-handed alpha
Helix 5
AA5
A
133 143Right-handed alpha
Helix 6
AA6
A
157 162Right-handed alpha
Helix 7
AA7
A
163 166Right-handed 310
Helix 8
AA8
B
14 22Right-handed alpha
Helix 9
AA9
B
41 51Right-handed alpha
Helix 10
AB1
B
70 89Right-handed alpha
Helix 11
AB2
B
103 117Right-handed alpha
Helix 12
AB3
B
133 143Right-handed alpha
Helix 13
AB4
B
157 162Right-handed alpha
Helix 14
AB5
B
163 166Right-handed 310
Helix 15
AB6
C
14 22Right-handed alpha
Helix 16
AB7
C
42 47Right-handed alpha
Helix 17
AB8
C
48 52Right-handed 310
Helix 18
AB9
C
70 89Right-handed alpha
Helix 19
AC1
C
103 118Right-handed alpha
Helix 20
AC2
C
133 143Right-handed alpha
Helix 21
AC3
C
157 162Right-handed alpha
Helix 22
AC4
C
163 166Right-handed 310
Helix 23
AC5
D
14 21Right-handed alpha
Helix 24
AC6
D
42 50Right-handed alpha
Helix 25
AC7
D
70 88Right-handed alpha
Helix 26
AC8
D
103 118Right-handed alpha
Helix 27
AC9
D
133 144Right-handed alpha
Helix 28
AD1
D
158 163Right-handed alpha
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There are 4 sheets in PDB entry 9C6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 62first strand
Strand 2
A
29 35parallel
Strand 3
A
4 8parallel
Strand 4
A
96 98parallel
Strand 5
A
119 126parallel
Strand 6
A
147 154anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 61first strand
Strand 2
B
29 34parallel
Strand 3
B
4 8parallel
Strand 4
B
96 98parallel
Strand 5
B
121 126parallel
Strand 6
B
147 150anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 62first strand
Strand 2
C
29 35parallel
Strand 3
C
4 8parallel
Strand 4
C
96 98parallel
Strand 5
C
119 127parallel
Strand 6
C
146 154anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 62first strand
Strand 2
D
29 35parallel
Strand 3
D
4 9parallel
Strand 4
D
96 98parallel
Strand 5
D
119 127parallel
Strand 6
D
146 154anti-parallel
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