Analysis of interatomic Contacts of Structural Units in PDB entry:
9C6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C6V entry

There is 1 chain in PDB entry 9C6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 323GLU 2275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 9C6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2049 2053Right-handed 310
Helix 2
AA2
A
2056 2085Right-handed alpha
Helix 3
AA3
A
2137 2150Right-handed alpha
Helix 4
AA4
A
2151 2162Right-handed alpha
Helix 5
AA5
A
2162 2175Right-handed alpha
Helix 6
AA6
A
2175 2180Right-handed alpha
Helix 7
AA7
A
2253 2255Right-handed 310
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There are 7 sheets in PDB entry 9C6V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1007 1012first strand
Strand 2
A
1022 1031anti-parallel
Strand 3
A
1063 1071anti-parallel
Strand 4
A
1051 1052anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1007 1012first strand
Strand 2
A
1022 1031anti-parallel
Strand 3
A
1063 1071anti-parallel
Strand 4
A
1056 1057anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1045 1046first strand
Strand 2
A
1037 1042anti-parallel
Strand 3
A
1079 1084anti-parallel
Strand 4
A
1092 1095anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2046 2047first strand
Strand 2
A
2031 2037anti-parallel
Strand 3
A
2021 2028anti-parallel
Strand 4
A
2003 2012anti-parallel
Strand 5
A
2094 2103anti-parallel
Strand 6
A
2109 2118anti-parallel
Strand 7
A
2121 2126anti-parallel
Strand 8
A
2133 2135anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2186 2193first strand
Strand 2
A
2199 2208anti-parallel
Strand 3
A
2241 2249anti-parallel
Strand 4
A
2228 2230anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2186 2193first strand
Strand 2
A
2199 2208anti-parallel
Strand 3
A
2241 2249anti-parallel
Strand 4
A
2234 2235anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2222 2223first strand
Strand 2
A
2214 2219anti-parallel
Strand 3
A
2257 2262anti-parallel
Strand 4
A
2270 2273anti-parallel
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