Analysis of interatomic Contacts of Structural Units in PDB entry:
9C95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9C95 entry

There are 2 chains in PDB entry 9C95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3ALA 336
B
 GLY 3ALA 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9C95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 23Right-handed alpha
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
52 67Right-handed alpha
Helix 5
AA5
A
79 83Right-handed 310
Helix 6
AA6
A
87 101Right-handed alpha
Helix 7
AA7
A
103 117Right-handed alpha
Helix 8
AA8
A
140 153Right-handed alpha
Helix 9
AA9
A
155 172Right-handed alpha
Helix 10
AB1
A
208 226Right-handed alpha
Helix 11
AB2
A
227 244Right-handed alpha
Helix 12
AB3
A
246 251Right-handed 310
Helix 13
AB4
A
252 254Right-handed 310
Helix 14
AB5
A
255 270Right-handed alpha
Helix 15
AB6
A
271 289Right-handed alpha
Helix 16
AB7
A
307 336Right-handed alpha
Helix 17
AB8
B
5 23Right-handed alpha
Helix 18
AB9
B
36 40Right-handed 310
Helix 19
AC1
B
42 50Right-handed alpha
Helix 20
AC2
B
52 67Right-handed alpha
Helix 21
AC3
B
79 83Right-handed 310
Helix 22
AC4
B
87 101Right-handed alpha
Helix 23
AC5
B
103 117Right-handed alpha
Helix 24
AC6
B
140 154Right-handed alpha
Helix 25
AC7
B
155 172Right-handed alpha
Helix 26
AC8
B
208 226Right-handed alpha
Helix 27
AC9
B
227 244Right-handed alpha
Helix 28
AD1
B
246 251Right-handed 310
Helix 29
AD2
B
252 254Right-handed 310
Helix 30
AD3
B
255 270Right-handed alpha
Helix 31
AD4
B
271 289Right-handed alpha
Helix 32
AD5
B
307 336Right-handed alpha
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There are 4 sheets in PDB entry 9C95. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
183 184anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 181first strand
Strand 2
A
198 200anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
183 184anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 181first strand
Strand 2
B
198 200anti-parallel
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