Analysis of interatomic Contacts of Structural Units in PDB entry:
9CAZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CAZ entry

There are 4 chains in PDB entry 9CAZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	SER 834
B	THR 33	LEU 843
C	THR 33	PHE 836
D	THR 33	GLU 841

There are108 helices in PDB entry 9CAZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	101	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	167	Right-handed alpha
Helix 5	AA5	A	179	184	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	190	195	Right-handed alpha
Helix 8	AA8	A	211	221	Right-handed alpha
Helix 9	AA9	A	231	246	Right-handed alpha
Helix 10	AB1	A	266	271	Right-handed alpha
Helix 11	AB2	A	286	300	Right-handed alpha
Helix 12	AB3	A	306	310	Right-handed 310
Helix 13	AB4	A	317	336	Right-handed alpha
Helix 14	AB5	A	356	366	Right-handed alpha
Helix 15	AB6	A	461	475	Right-handed alpha
Helix 16	AB7	A	492	496	Right-handed 310
Helix 17	AB8	A	520	525	Right-handed alpha
Helix 18	AB9	A	560	582	Right-handed alpha
Helix 19	AC1	A	632	665	Right-handed alpha
Helix 20	AC2	A	671	677	Right-handed alpha
Helix 21	AC3	A	691	696	Right-handed alpha
Helix 22	AC4	A	699	712	Right-handed alpha
Helix 23	AC5	A	723	730	Right-handed alpha
Helix 24	AC6	A	739	749	Right-handed alpha
Helix 25	AC7	A	774	789	Right-handed alpha
Helix 26	AC8	A	789	802	Right-handed alpha
Helix 27	AC9	A	821	834	Right-handed alpha
Helix 28	AD1	B	51	67	Right-handed alpha
Helix 29	AD2	B	87	101	Right-handed alpha
Helix 30	AD3	B	111	126	Right-handed alpha
Helix 31	AD4	B	152	168	Right-handed alpha
Helix 32	AD5	B	180	185	Right-handed alpha
Helix 33	AD6	B	190	195	Right-handed alpha
Helix 34	AD7	B	211	222	Right-handed alpha
Helix 35	AD8	B	231	245	Right-handed alpha
Helix 36	AD9	B	260	264	Right-handed 310
Helix 37	AE1	B	286	300	Right-handed alpha
Helix 38	AE2	B	317	337	Right-handed alpha
Helix 39	AE3	B	355	365	Right-handed alpha
Helix 40	AE4	B	461	474	Right-handed alpha
Helix 41	AE5	B	501	507	Right-handed alpha
Helix 42	AE6	B	520	527	Right-handed alpha
Helix 43	AE7	B	551	556	Right-handed alpha
Helix 44	AE8	B	560	584	Right-handed alpha
Helix 45	AE9	B	634	662	Right-handed alpha
Helix 46	AF1	B	670	677	Right-handed alpha
Helix 47	AF2	B	688	695	Right-handed alpha
Helix 48	AF3	B	701	712	Right-handed alpha
Helix 49	AF4	B	720	731	Right-handed alpha
Helix 50	AF5	B	739	747	Right-handed alpha
Helix 51	AF6	B	772	788	Right-handed alpha
Helix 52	AF7	B	789	798	Right-handed alpha
Helix 53	AF8	B	821	843	Right-handed alpha
Helix 54	AF9	C	51	67	Right-handed alpha
Helix 55	AG1	C	87	101	Right-handed alpha
Helix 56	AG2	C	113	125	Right-handed alpha
Helix 57	AG3	C	152	168	Right-handed alpha
Helix 58	AG4	C	179	185	Right-handed alpha
Helix 59	AG5	C	186	195	Right-handed alpha
Helix 60	AG6	C	211	222	Right-handed alpha
Helix 61	AG7	C	231	245	Right-handed alpha
Helix 62	AG8	C	260	264	Right-handed 310
Helix 63	AG9	C	266	271	Right-handed alpha
Helix 64	AH1	C	286	300	Right-handed alpha
Helix 65	AH2	C	317	336	Right-handed alpha
Helix 66	AH3	C	355	365	Right-handed alpha
Helix 67	AH4	C	454	457	Right-handed 310
Helix 68	AH5	C	461	474	Right-handed alpha
Helix 69	AH6	C	499	507	Right-handed alpha
Helix 70	AH7	C	520	527	Right-handed alpha
Helix 71	AH8	C	553	557	Right-handed 310
Helix 72	AH9	C	560	584	Right-handed alpha
Helix 73	AI1	C	631	665	Right-handed alpha
Helix 74	AI2	C	670	677	Right-handed alpha
Helix 75	AI3	C	688	697	Right-handed alpha
Helix 76	AI4	C	699	712	Right-handed alpha
Helix 77	AI5	C	720	731	Right-handed alpha
Helix 78	AI6	C	739	749	Right-handed alpha
Helix 79	AI7	C	773	789	Right-handed alpha
Helix 80	AI8	C	789	800	Right-handed alpha
Helix 81	AI9	C	801	804	Right-handed 310
Helix 82	AJ1	C	822	834	Right-handed alpha
Helix 83	AJ2	D	51	67	Right-handed alpha
Helix 84	AJ3	D	87	101	Right-handed alpha
Helix 85	AJ4	D	111	126	Right-handed alpha
Helix 86	AJ5	D	154	168	Right-handed alpha
Helix 87	AJ6	D	178	183	Right-handed alpha
Helix 88	AJ7	D	185	195	Right-handed alpha
Helix 89	AJ8	D	211	222	Right-handed alpha
Helix 90	AJ9	D	231	245	Right-handed alpha
Helix 91	AK1	D	260	264	Right-handed 310
Helix 92	AK2	D	269	273	Right-handed 310
Helix 93	AK3	D	286	301	Right-handed alpha
Helix 94	AK4	D	317	337	Right-handed alpha
Helix 95	AK5	D	355	365	Right-handed alpha
Helix 96	AK6	D	454	459	Right-handed 310
Helix 97	AK7	D	461	474	Right-handed alpha
Helix 98	AK8	D	500	505	Right-handed 310
Helix 99	AK9	D	520	527	Right-handed alpha
Helix 100	AL1	D	560	580	Right-handed alpha
Helix 101	AL2	D	634	665	Right-handed alpha
Helix 102	AL3	D	688	696	Right-handed alpha
Helix 103	AL4	D	699	712	Right-handed alpha
Helix 104	AL5	D	720	731	Right-handed alpha
Helix 105	AL6	D	739	749	Right-handed alpha
Helix 106	AL7	D	773	788	Right-handed alpha
Helix 107	AL8	D	790	801	Right-handed alpha
Helix 108	AL9	D	816	841	Right-handed alpha

There are 35 sheets in PDB entry 9CAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	83	first strand
Strand 2	A	38	43	parallel
Strand 3	A	105	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	151	parallel
Strand 6	A	383	384	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	176	first strand
Strand 2	A	201	203	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	228	first strand
Strand 2	A	253	256	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	394	first strand
Strand 2	A	399	406	anti-parallel
Strand 3	A	410	411	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	436	first strand
Strand 2	A	480	481	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	738	first strand
Strand 2	A	538	542	anti-parallel
Strand 3	A	753	755	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	83	first strand
Strand 2	B	35	43	parallel
Strand 3	B	105	107	parallel
Strand 4	B	129	131	parallel
Strand 5	B	146	148	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	176	first strand
Strand 2	B	202	203	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	228	first strand
Strand 2	B	253	256	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	392	395	first strand
Strand 2	B	398	401	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	406	first strand
Strand 2	B	410	411	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	437	first strand
Strand 2	B	478	482	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	528	529	first strand
Strand 2	B	767	768	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	681	683	first strand
Strand 2	B	733	738	parallel
Strand 3	B	538	543	anti-parallel
Strand 4	B	752	755	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	83	first strand
Strand 2	C	34	43	parallel
Strand 3	C	106	107	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	131	first strand
Strand 2	C	147	148	parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	203	first strand
Strand 2	C	174	176	parallel
Strand 3	C	225	229	parallel
Strand 4	C	253	256	parallel
Strand 5	C	277	280	parallel
Strand 6	C	389	393	anti-parallel
Strand 7	C	400	406	anti-parallel
Strand 8	C	410	412	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	369	370	first strand
Strand 2	C	373	374	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	437	first strand
Strand 2	C	478	482	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	529	first strand
Strand 2	C	767	768	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	684	first strand
Strand 2	C	733	738	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	752	754	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	83	first strand
Strand 2	D	34	43	parallel
Strand 3	D	106	107	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	343	344	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	130	131	first strand
Strand 2	D	147	148	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	176	first strand
Strand 2	D	202	203	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	226	first strand
Strand 2	D	253	254	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	370	first strand
Strand 2	D	373	378	anti-parallel
Strand 3	D	381	386	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	392	395	first strand
Strand 2	D	398	401	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	405	406	first strand
Strand 2	D	410	411	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	433	436	first strand
Strand 2	D	478	481	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	490	491	first strand
Strand 2	D	498	499	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	536	first strand
Strand 2	D	762	764	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	682	first strand
Strand 2	D	733	738	parallel
Strand 3	D	538	543	anti-parallel
Strand 4	D	752	754	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CAZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CAZ