Analysis of interatomic Contacts of Structural Units in PDB entry:
9CC3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CC3 entry

There are 7 chains in PDB entry 9CC3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	UNK -1	UNK 28
A	GLN 376	ASP 949
B	LEU 396	ASP 949
C	GLN 376	ASP 949
D	LEU 395	ASP 949
E	GLN 376	ASP 949
F	LEU 396	ASP 949

There are163 helices in PDB entry 9CC3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	-1	1	Right-handed 310
Helix 2	AA2	G	2	15	Right-handed alpha
Helix 3	AA3	A	377	408	Right-handed alpha
Helix 4	AA4	A	413	426	Right-handed alpha
Helix 5	AA5	A	431	447	Right-handed alpha
Helix 6	AA6	A	452	468	Right-handed alpha
Helix 7	AA7	A	479	491	Right-handed alpha
Helix 8	AA8	A	494	512	Right-handed alpha
Helix 9	AA9	A	528	541	Right-handed alpha
Helix 10	AB1	A	555	560	Right-handed alpha
Helix 11	AB2	A	571	581	Right-handed alpha
Helix 12	AB3	A	591	595	Right-handed 310
Helix 13	AB4	A	604	612	Right-handed alpha
Helix 14	AB5	A	615	618	Right-handed 310
Helix 15	AB6	A	629	633	Right-handed 310
Helix 16	AB7	A	646	651	Right-handed alpha
Helix 17	AB8	A	662	673	Right-handed alpha
Helix 18	AB9	A	673	683	Right-handed alpha
Helix 19	AC1	A	692	704	Right-handed alpha
Helix 20	AC2	A	709	729	Right-handed alpha
Helix 21	AC3	A	742	747	Right-handed alpha
Helix 22	AC4	A	807	829	Right-handed alpha
Helix 23	AC5	A	833	838	Right-handed alpha
Helix 24	AC6	A	853	855	Right-handed 310
Helix 25	AC7	A	856	870	Right-handed alpha
Helix 26	AC8	A	894	905	Right-handed alpha
Helix 27	AC9	A	916	922	Right-handed alpha
Helix 28	AD1	A	938	947	Right-handed alpha
Helix 29	AD2	B	398	409	Right-handed alpha
Helix 30	AD3	B	413	415	Right-handed 310
Helix 31	AD4	B	416	423	Right-handed alpha
Helix 32	AD5	B	424	426	Right-handed 310
Helix 33	AD6	B	431	448	Right-handed alpha
Helix 34	AD7	B	452	466	Right-handed alpha
Helix 35	AD8	B	479	491	Right-handed alpha
Helix 36	AD9	B	494	512	Right-handed alpha
Helix 37	AE1	B	531	541	Right-handed alpha
Helix 38	AE2	B	555	560	Right-handed alpha
Helix 39	AE3	B	571	581	Right-handed alpha
Helix 40	AE4	B	591	595	Right-handed 310
Helix 41	AE5	B	603	611	Right-handed alpha
Helix 42	AE6	B	615	619	Right-handed 310
Helix 43	AE7	B	641	645	Right-handed 310
Helix 44	AE8	B	646	653	Right-handed alpha
Helix 45	AE9	B	662	673	Right-handed alpha
Helix 46	AF1	B	673	683	Right-handed alpha
Helix 47	AF2	B	692	704	Right-handed alpha
Helix 48	AF3	B	709	729	Right-handed alpha
Helix 49	AF4	B	741	745	Right-handed 310
Helix 50	AF5	B	807	829	Right-handed alpha
Helix 51	AF6	B	833	838	Right-handed alpha
Helix 52	AF7	B	853	855	Right-handed 310
Helix 53	AF8	B	856	870	Right-handed alpha
Helix 54	AF9	B	894	905	Right-handed alpha
Helix 55	AG1	B	916	922	Right-handed alpha
Helix 56	AG2	B	924	929	Right-handed alpha
Helix 57	AG3	B	938	947	Right-handed alpha
Helix 58	AG4	C	377	408	Right-handed alpha
Helix 59	AG5	C	413	423	Right-handed alpha
Helix 60	AG6	C	424	428	Right-handed 310
Helix 61	AG7	C	431	446	Right-handed alpha
Helix 62	AG8	C	452	466	Right-handed alpha
Helix 63	AG9	C	479	489	Right-handed alpha
Helix 64	AH1	C	494	511	Right-handed alpha
Helix 65	AH2	C	528	541	Right-handed alpha
Helix 66	AH3	C	555	560	Right-handed alpha
Helix 67	AH4	C	571	581	Right-handed alpha
Helix 68	AH5	C	591	595	Right-handed 310
Helix 69	AH6	C	603	608	Right-handed alpha
Helix 70	AH7	C	615	618	Right-handed 310
Helix 71	AH8	C	646	653	Right-handed alpha
Helix 72	AH9	C	662	673	Right-handed alpha
Helix 73	AI1	C	673	683	Right-handed alpha
Helix 74	AI2	C	692	703	Right-handed alpha
Helix 75	AI3	C	709	729	Right-handed alpha
Helix 76	AI4	C	742	747	Right-handed alpha
Helix 77	AI5	C	807	829	Right-handed alpha
Helix 78	AI6	C	833	838	Right-handed alpha
Helix 79	AI7	C	853	855	Right-handed 310
Helix 80	AI8	C	856	870	Right-handed alpha
Helix 81	AI9	C	894	906	Right-handed alpha
Helix 82	AJ1	C	916	921	Right-handed alpha
Helix 83	AJ2	C	924	929	Right-handed alpha
Helix 84	AJ3	C	938	947	Right-handed alpha
Helix 85	AJ4	D	396	408	Right-handed alpha
Helix 86	AJ5	D	415	426	Right-handed alpha
Helix 87	AJ6	D	431	446	Right-handed alpha
Helix 88	AJ7	D	452	467	Right-handed alpha
Helix 89	AJ8	D	479	491	Right-handed alpha
Helix 90	AJ9	D	494	512	Right-handed alpha
Helix 91	AK1	D	528	541	Right-handed alpha
Helix 92	AK2	D	555	560	Right-handed alpha
Helix 93	AK3	D	571	581	Right-handed alpha
Helix 94	AK4	D	592	595	Right-handed 310
Helix 95	AK5	D	602	602	Right-handed 310
Helix 96	AK6	D	603	611	Right-handed alpha
Helix 97	AK7	D	646	653	Right-handed alpha
Helix 98	AK8	D	662	673	Right-handed alpha
Helix 99	AK9	D	673	683	Right-handed alpha
Helix 100	AL1	D	692	703	Right-handed alpha
Helix 101	AL2	D	709	729	Right-handed alpha
Helix 102	AL3	D	741	745	Right-handed 310
Helix 103	AL4	D	807	829	Right-handed alpha
Helix 104	AL5	D	833	838	Right-handed alpha
Helix 105	AL6	D	853	855	Right-handed 310
Helix 106	AL7	D	856	870	Right-handed alpha
Helix 107	AL8	D	894	905	Right-handed alpha
Helix 108	AL9	D	916	921	Right-handed alpha
Helix 109	AM1	D	924	929	Right-handed alpha
Helix 110	AM2	D	938	947	Right-handed alpha
Helix 111	AM3	E	377	408	Right-handed alpha
Helix 112	AM4	E	409	411	Right-handed 310
Helix 113	AM5	E	413	424	Right-handed alpha
Helix 114	AM6	E	431	448	Right-handed alpha
Helix 115	AM7	E	452	467	Right-handed alpha
Helix 116	AM8	E	479	490	Right-handed alpha
Helix 117	AM9	E	494	512	Right-handed alpha
Helix 118	AN1	E	528	541	Right-handed alpha
Helix 119	AN2	E	555	560	Right-handed alpha
Helix 120	AN3	E	572	581	Right-handed alpha
Helix 121	AN4	E	591	595	Right-handed 310
Helix 122	AN5	E	603	612	Right-handed alpha
Helix 123	AN6	E	615	618	Right-handed 310
Helix 124	AN7	E	646	651	Right-handed alpha
Helix 125	AN8	E	662	673	Right-handed alpha
Helix 126	AN9	E	673	683	Right-handed alpha
Helix 127	AO1	E	692	703	Right-handed alpha
Helix 128	AO2	E	709	729	Right-handed alpha
Helix 129	AO3	E	738	745	Right-handed 310
Helix 130	AO4	E	807	829	Right-handed alpha
Helix 131	AO5	E	833	838	Right-handed alpha
Helix 132	AO6	E	853	855	Right-handed 310
Helix 133	AO7	E	856	870	Right-handed alpha
Helix 134	AO8	E	894	906	Right-handed alpha
Helix 135	AO9	E	916	921	Right-handed alpha
Helix 136	AP1	E	924	929	Right-handed alpha
Helix 137	AP2	E	938	947	Right-handed alpha
Helix 138	AP3	F	397	409	Right-handed alpha
Helix 139	AP4	F	415	425	Right-handed alpha
Helix 140	AP5	F	431	445	Right-handed alpha
Helix 141	AP6	F	446	448	Right-handed 310
Helix 142	AP7	F	452	466	Right-handed alpha
Helix 143	AP8	F	479	491	Right-handed alpha
Helix 144	AP9	F	494	512	Right-handed alpha
Helix 145	AQ1	F	528	540	Right-handed alpha
Helix 146	AQ2	F	555	560	Right-handed alpha
Helix 147	AQ3	F	571	581	Right-handed alpha
Helix 148	AQ4	F	591	595	Right-handed 310
Helix 149	AQ5	F	603	612	Right-handed alpha
Helix 150	AQ6	F	612	617	Right-handed alpha
Helix 151	AQ7	F	646	652	Right-handed alpha
Helix 152	AQ8	F	662	683	Right-handed alpha
Helix 153	AQ9	F	692	703	Right-handed alpha
Helix 154	AR1	F	709	729	Right-handed alpha
Helix 155	AR2	F	741	746	Right-handed alpha
Helix 156	AR3	F	807	829	Right-handed alpha
Helix 157	AR4	F	833	838	Right-handed alpha
Helix 158	AR5	F	853	855	Right-handed 310
Helix 159	AR6	F	856	870	Right-handed alpha
Helix 160	AR7	F	894	905	Right-handed alpha
Helix 161	AR8	F	916	922	Right-handed alpha
Helix 162	AR9	F	924	929	Right-handed alpha
Helix 163	AS1	F	938	947	Right-handed alpha

There are 35 sheets in PDB entry 9CC3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	548	first strand
Strand 2	A	586	590	parallel
Strand 3	A	634	639	parallel
Strand 4	A	518	522	parallel
Strand 5	A	653	657	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	619	620	first strand
Strand 2	A	627	628	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	690	first strand
Strand 2	A	735	736	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	764	769	first strand
Strand 2	A	776	784	anti-parallel
Strand 3	A	839	843	anti-parallel
Strand 4	A	799	803	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	877	879	first strand
Strand 2	A	909	913	parallel
Strand 3	A	934	936	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	882	883	first strand
Strand 2	A	889	890	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	548	first strand
Strand 2	B	586	590	parallel
Strand 3	B	634	639	parallel
Strand 4	B	518	522	parallel
Strand 5	B	654	657	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	690	first strand
Strand 2	B	735	736	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	764	770	first strand
Strand 2	B	775	784	anti-parallel
Strand 3	B	840	843	anti-parallel
Strand 4	B	800	803	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	877	879	first strand
Strand 2	B	909	913	parallel
Strand 3	B	932	936	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	882	883	first strand
Strand 2	B	889	890	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	548	first strand
Strand 2	C	586	590	parallel
Strand 3	C	634	639	parallel
Strand 4	C	518	522	parallel
Strand 5	C	654	657	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	619	620	first strand
Strand 2	C	627	628	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	690	first strand
Strand 2	C	735	736	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	765	769	first strand
Strand 2	C	776	784	anti-parallel
Strand 3	C	839	843	anti-parallel
Strand 4	C	799	803	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	877	879	first strand
Strand 2	C	909	913	parallel
Strand 3	C	932	936	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	883	first strand
Strand 2	C	889	890	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	544	548	first strand
Strand 2	D	586	590	parallel
Strand 3	D	634	639	parallel
Strand 4	D	518	522	parallel
Strand 5	D	655	657	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	689	690	first strand
Strand 2	D	735	736	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	764	771	first strand
Strand 2	D	774	784	anti-parallel
Strand 3	D	839	843	anti-parallel
Strand 4	D	799	803	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	877	879	first strand
Strand 2	D	909	913	parallel
Strand 3	D	932	936	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	882	883	first strand
Strand 2	D	889	890	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	544	548	first strand
Strand 2	E	586	590	parallel
Strand 3	E	634	639	parallel
Strand 4	E	518	522	parallel
Strand 5	E	654	657	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	619	620	first strand
Strand 2	E	627	628	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	689	691	first strand
Strand 2	E	735	737	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	765	771	first strand
Strand 2	E	774	784	anti-parallel
Strand 3	E	839	843	anti-parallel
Strand 4	E	799	803	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	877	879	first strand
Strand 2	E	909	913	parallel
Strand 3	E	932	936	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	882	883	first strand
Strand 2	E	889	890	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	544	548	first strand
Strand 2	F	586	590	parallel
Strand 3	F	634	639	parallel
Strand 4	F	518	522	parallel
Strand 5	F	653	657	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	619	620	first strand
Strand 2	F	627	628	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	689	691	first strand
Strand 2	F	735	737	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	764	766	first strand
Strand 2	F	779	784	anti-parallel
Strand 3	F	839	843	anti-parallel
Strand 4	F	799	803	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	769	771	first strand
Strand 2	F	774	776	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	877	879	first strand
Strand 2	F	909	913	parallel
Strand 3	F	932	936	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	882	883	first strand
Strand 2	F	889	890	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CC3

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CC3