Analysis of interatomic Contacts of Structural Units in PDB entry:
9CC7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CC7 entry

There are 10 chains in PDB entry 9CC7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	MET 1	PRO 163
E	ALA 4	GLY 145
F	PRO 4	MET 218
G	LEU 8	ILE 148
H	ASN 3	ALA 149
C	MET 1	PRO 163
I	GLY 16	PRO 465
J	GLU 3	MET 466
A	ARG 27	VAL 448
B	ARG 27	VAL 448

There are101 helices in PDB entry 9CC7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	4	14	Right-handed alpha
Helix 2	AA2	D	23	39	Right-handed alpha
Helix 3	AA3	D	43	45	Right-handed 310
Helix 4	AA4	D	46	67	Right-handed alpha
Helix 5	AA5	D	94	107	Right-handed alpha
Helix 6	AA6	D	108	111	Right-handed 310
Helix 7	AA7	D	112	116	Right-handed 310
Helix 8	AA8	D	128	137	Right-handed alpha
Helix 9	AA9	D	143	147	Right-handed 310
Helix 10	AB1	E	6	10	Right-handed 310
Helix 11	AB2	E	62	66	Right-handed 310
Helix 12	AB3	F	9	30	Right-handed alpha
Helix 13	AB4	F	90	102	Right-handed alpha
Helix 14	AB5	F	104	112	Right-handed alpha
Helix 15	AB6	G	14	18	Right-handed 310
Helix 16	AB7	G	76	92	Right-handed alpha
Helix 17	AB8	H	3	7	Right-handed 310
Helix 18	AB9	H	14	18	Right-handed 310
Helix 19	AC1	H	76	92	Right-handed alpha
Helix 20	AC2	C	2	14	Right-handed alpha
Helix 21	AC3	C	23	39	Right-handed alpha
Helix 22	AC4	C	43	45	Right-handed 310
Helix 23	AC5	C	46	67	Right-handed alpha
Helix 24	AC6	C	94	105	Right-handed alpha
Helix 25	AC7	C	106	111	Right-handed 310
Helix 26	AC8	C	112	116	Right-handed 310
Helix 27	AC9	C	128	137	Right-handed alpha
Helix 28	AD1	C	143	147	Right-handed 310
Helix 29	AD2	I	23	26	Right-handed 310
Helix 30	AD3	I	46	53	Right-handed alpha
Helix 31	AD4	I	59	70	Right-handed alpha
Helix 32	AD5	I	123	131	Right-handed alpha
Helix 33	AD6	I	132	134	Right-handed 310
Helix 34	AD7	I	182	194	Right-handed alpha
Helix 35	AD8	I	206	221	Right-handed alpha
Helix 36	AD9	I	230	234	Right-handed 310
Helix 37	AE1	I	242	251	Right-handed alpha
Helix 38	AE2	I	261	266	Right-handed alpha
Helix 39	AE3	I	267	274	Right-handed alpha
Helix 40	AE4	I	279	283	Right-handed 310
Helix 41	AE5	I	300	310	Right-handed alpha
Helix 42	AE6	I	334	362	Right-handed alpha
Helix 43	AE7	I	372	374	Right-handed 310
Helix 44	AE8	I	375	383	Right-handed alpha
Helix 45	AE9	I	383	392	Right-handed alpha
Helix 46	AF1	I	414	418	Right-handed 310
Helix 47	AF2	I	419	426	Right-handed alpha
Helix 48	AF3	J	46	52	Right-handed alpha
Helix 49	AF4	J	59	70	Right-handed alpha
Helix 50	AF5	J	124	137	Right-handed alpha
Helix 51	AF6	J	182	194	Right-handed alpha
Helix 52	AF7	J	206	221	Right-handed alpha
Helix 53	AF8	J	231	235	Right-handed 310
Helix 54	AF9	J	242	251	Right-handed alpha
Helix 55	AG1	J	261	266	Right-handed alpha
Helix 56	AG2	J	267	274	Right-handed alpha
Helix 57	AG3	J	279	283	Right-handed 310
Helix 58	AG4	J	300	310	Right-handed alpha
Helix 59	AG5	J	334	361	Right-handed alpha
Helix 60	AG6	J	374	383	Right-handed alpha
Helix 61	AG7	J	384	392	Right-handed alpha
Helix 62	AG8	J	414	418	Right-handed 310
Helix 63	AG9	J	419	426	Right-handed alpha
Helix 64	AH1	A	35	46	Right-handed alpha
Helix 65	AH2	A	48	51	Right-handed 310
Helix 66	AH3	A	52	63	Right-handed alpha
Helix 67	AH4	A	66	84	Right-handed alpha
Helix 68	AH5	A	94	109	Right-handed alpha
Helix 69	AH6	A	115	124	Right-handed alpha
Helix 70	AH7	A	125	130	Right-handed alpha
Helix 71	AH8	A	184	189	Right-handed 310
Helix 72	AH9	A	232	256	Right-handed alpha
Helix 73	AI1	A	267	277	Right-handed alpha
Helix 74	AI2	A	280	293	Right-handed alpha
Helix 75	AI3	A	332	347	Right-handed alpha
Helix 76	AI4	A	348	349	Right-handed 310
Helix 77	AI5	A	350	355	Right-handed 310
Helix 78	AI6	A	371	391	Right-handed alpha
Helix 79	AI7	A	392	400	Right-handed alpha
Helix 80	AI8	A	405	409	Right-handed 310
Helix 81	AI9	A	421	434	Right-handed alpha
Helix 82	AJ1	A	441	446	Right-handed alpha
Helix 83	AJ2	B	35	46	Right-handed alpha
Helix 84	AJ3	B	48	51	Right-handed 310
Helix 85	AJ4	B	52	63	Right-handed alpha
Helix 86	AJ5	B	66	84	Right-handed alpha
Helix 87	AJ6	B	94	109	Right-handed alpha
Helix 88	AJ7	B	115	124	Right-handed alpha
Helix 89	AJ8	B	125	130	Right-handed alpha
Helix 90	AJ9	B	184	189	Right-handed 310
Helix 91	AK1	B	232	256	Right-handed alpha
Helix 92	AK2	B	267	277	Right-handed alpha
Helix 93	AK3	B	280	293	Right-handed alpha
Helix 94	AK4	B	332	347	Right-handed alpha
Helix 95	AK5	B	348	349	Right-handed 310
Helix 96	AK6	B	350	355	Right-handed 310
Helix 97	AK7	B	371	391	Right-handed alpha
Helix 98	AK8	B	392	400	Right-handed alpha
Helix 99	AK9	B	405	409	Right-handed 310
Helix 100	AL1	B	421	434	Right-handed alpha
Helix 101	AL2	B	441	446	Right-handed alpha

There are 30 sheets in PDB entry 9CC7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	80	first strand
Strand 2	D	85	86	anti-parallel
Strand 3	C	79	80	anti-parallel
Strand 4	C	85	86	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	124	first strand
Strand 2	A	304	307	anti-parallel
Strand 3	B	262	266	parallel
Strand 4	B	318	321	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	18	25	first strand
Strand 2	E	45	56	anti-parallel
Strand 3	E	80	85	anti-parallel
Strand 4	E	131	137	anti-parallel
Strand 5	E	112	121	anti-parallel
Strand 6	E	102	106	anti-parallel
Strand 7	E	18	25	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	70	first strand
Strand 2	E	75	77	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	35	first strand
Strand 2	F	47	57	parallel
Strand 3	F	72	86	anti-parallel
Strand 4	F	137	155	anti-parallel
Strand 5	F	118	123	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	63	66	first strand
Strand 2	F	72	86	anti-parallel
Strand 3	F	137	155	anti-parallel
Strand 4	F	127	133	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	165	172	first strand
Strand 2	F	180	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	216	first strand
Strand 2	I	443	446	parallel
Strand 3	J	427	436	parallel
Strand 4	I	450	451	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	216	first strand
Strand 2	I	443	446	parallel
Strand 3	J	427	436	parallel
Strand 4	J	409	411	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	25	26	first strand
Strand 2	G	20	22	anti-parallel
Strand 3	G	96	100	anti-parallel
Strand 4	G	108	116	anti-parallel
Strand 5	G	129	135	anti-parallel
Strand 6	G	65	71	anti-parallel
Strand 7	G	36	40	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	49	first strand
Strand 2	G	55	59	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	26	first strand
Strand 2	H	20	22	anti-parallel
Strand 3	H	96	100	anti-parallel
Strand 4	H	108	114	anti-parallel
Strand 5	H	129	135	anti-parallel
Strand 6	H	65	71	anti-parallel
Strand 7	H	36	40	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	49	first strand
Strand 2	H	55	59	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	41	44	first strand
Strand 2	I	78	83	anti-parallel
Strand 3	I	28	33	parallel
Strand 4	I	199	202	parallel
Strand 5	I	223	228	parallel
Strand 6	I	255	258	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	149	first strand
Strand 2	I	153	157	anti-parallel
Strand 3	I	87	91	anti-parallel
Strand 4	I	174	178	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	110	116	first strand
Strand 2	I	101	107	anti-parallel
Strand 3	I	164	167	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	316	318	first strand
Strand 2	I	321	323	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	409	411	first strand
Strand 2	I	432	434	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	41	44	first strand
Strand 2	J	78	81	anti-parallel
Strand 3	J	29	31	parallel
Strand 4	J	199	202	parallel
Strand 5	J	223	228	parallel
Strand 6	J	255	258	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	33	34	first strand
Strand 2	J	83	91	parallel
Strand 3	J	153	157	anti-parallel
Strand 4	J	146	150	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	33	34	first strand
Strand 2	J	83	91	parallel
Strand 3	J	176	179	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	110	115	first strand
Strand 2	J	102	107	anti-parallel
Strand 3	J	165	170	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	315	316	first strand
Strand 2	J	323	324	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	90	first strand
Strand 2	A	411	413	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	158	first strand
Strand 2	A	131	140	anti-parallel
Strand 3	A	215	219	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	171	first strand
Strand 2	A	178	182	anti-parallel
Strand 3	A	209	211	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	265	first strand
Strand 2	A	318	321	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	90	first strand
Strand 2	B	411	413	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	158	first strand
Strand 2	B	131	140	anti-parallel
Strand 3	B	215	219	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	171	first strand
Strand 2	B	178	182	anti-parallel
Strand 3	B	209	211	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CC7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CC7