Analysis of interatomic Contacts of Structural Units in PDB entry:
9CE0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CE0 entry

There are 2 chains in PDB entry 9CE0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 20	LYS 806
B	GLY 20	LYS 806

There are 64 helices in PDB entry 9CE0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	28	Right-handed alpha
Helix 2	AA2	A	46	52	Right-handed alpha
Helix 3	AA3	A	56	61	Right-handed alpha
Helix 4	AA4	A	64	68	Right-handed 310
Helix 5	AA5	A	76	87	Right-handed alpha
Helix 6	AA6	A	87	92	Right-handed alpha
Helix 7	AA7	A	119	123	Right-handed 310
Helix 8	AA8	A	133	152	Right-handed alpha
Helix 9	AA9	A	170	178	Right-handed alpha
Helix 10	AB1	A	180	185	Right-handed alpha
Helix 11	AB2	A	188	193	Right-handed alpha
Helix 12	AB3	A	200	212	Right-handed alpha
Helix 13	AB4	A	256	275	Right-handed alpha
Helix 14	AB5	A	278	294	Right-handed alpha
Helix 15	AB6	A	352	383	Right-handed alpha
Helix 16	AB7	A	394	409	Right-handed alpha
Helix 17	AB8	A	421	429	Right-handed alpha
Helix 18	AB9	A	430	449	Right-handed alpha
Helix 19	AC1	A	471	485	Right-handed alpha
Helix 20	AC2	A	512	531	Right-handed alpha
Helix 21	AC3	A	542	563	Right-handed alpha
Helix 22	AC4	A	598	609	Right-handed alpha
Helix 23	AC5	A	611	634	Right-handed alpha
Helix 24	AC6	A	645	648	Right-handed 310
Helix 25	AC7	A	650	652	Right-handed 310
Helix 26	AC8	A	653	665	Right-handed alpha
Helix 27	AC9	A	688	699	Right-handed alpha
Helix 28	AD1	A	710	720	Right-handed alpha
Helix 29	AD2	A	728	736	Right-handed alpha
Helix 30	AD3	A	738	756	Right-handed alpha
Helix 31	AD4	A	766	777	Right-handed alpha
Helix 32	AD5	A	794	803	Right-handed alpha
Helix 33	AD6	B	23	28	Right-handed alpha
Helix 34	AD7	B	46	54	Right-handed alpha
Helix 35	AD8	B	56	61	Right-handed alpha
Helix 36	AD9	B	64	68	Right-handed 310
Helix 37	AE1	B	73	75	Right-handed 310
Helix 38	AE2	B	76	88	Right-handed alpha
Helix 39	AE3	B	89	92	Right-handed 310
Helix 40	AE4	B	134	153	Right-handed alpha
Helix 41	AE5	B	170	178	Right-handed alpha
Helix 42	AE6	B	180	185	Right-handed alpha
Helix 43	AE7	B	188	193	Right-handed alpha
Helix 44	AE8	B	201	210	Right-handed alpha
Helix 45	AE9	B	256	276	Right-handed alpha
Helix 46	AF1	B	278	294	Right-handed alpha
Helix 47	AF2	B	352	377	Right-handed alpha
Helix 48	AF3	B	394	408	Right-handed alpha
Helix 49	AF4	B	421	447	Right-handed alpha
Helix 50	AF5	B	471	486	Right-handed alpha
Helix 51	AF6	B	512	531	Right-handed alpha
Helix 52	AF7	B	539	562	Right-handed alpha
Helix 53	AF8	B	598	610	Right-handed alpha
Helix 54	AF9	B	611	632	Right-handed alpha
Helix 55	AG1	B	643	648	Right-handed alpha
Helix 56	AG2	B	650	654	Right-handed 310
Helix 57	AG3	B	655	665	Right-handed alpha
Helix 58	AG4	B	677	683	Right-handed alpha
Helix 59	AG5	B	686	699	Right-handed alpha
Helix 60	AG6	B	709	720	Right-handed alpha
Helix 61	AG7	B	728	733	Right-handed alpha
Helix 62	AG8	B	738	755	Right-handed alpha
Helix 63	AG9	B	766	776	Right-handed alpha
Helix 64	AH1	B	794	802	Right-handed alpha

There are 13 sheets in PDB entry 9CE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	36	first strand
Strand 2	A	125	132	anti-parallel
Strand 3	A	108	118	anti-parallel
Strand 4	A	96	102	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	168	first strand
Strand 2	A	157	160	anti-parallel
Strand 3	A	246	252	anti-parallel
Strand 4	A	232	240	anti-parallel
Strand 5	A	216	220	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	314	first strand
Strand 2	A	297	305	anti-parallel
Strand 3	A	338	347	anti-parallel
Strand 4	A	324	332	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	454	459	first strand
Strand 2	A	462	467	anti-parallel
Strand 3	A	413	419	anti-parallel
Strand 4	A	501	506	anti-parallel
Strand 5	A	534	536	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	492	first strand
Strand 2	A	495	497	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	573	first strand
Strand 2	A	580	591	anti-parallel
Strand 3	A	595	597	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	573	first strand
Strand 2	A	580	591	anti-parallel
Strand 3	A	640	643	parallel
Strand 4	A	672	675	parallel
Strand 5	A	701	704	parallel
Strand 6	A	724	727	parallel
Strand 7	A	758	764	parallel
Strand 8	A	782	783	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	45	first strand
Strand 2	B	32	36	anti-parallel
Strand 3	B	125	131	anti-parallel
Strand 4	B	108	118	anti-parallel
Strand 5	B	94	102	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	168	first strand
Strand 2	B	157	160	anti-parallel
Strand 3	B	246	255	anti-parallel
Strand 4	B	230	240	anti-parallel
Strand 5	B	216	222	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	314	first strand
Strand 2	B	298	305	anti-parallel
Strand 3	B	338	347	anti-parallel
Strand 4	B	324	332	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	459	first strand
Strand 2	B	462	467	anti-parallel
Strand 3	B	413	420	anti-parallel
Strand 4	B	500	506	anti-parallel
Strand 5	B	534	537	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	672	674	first strand
Strand 2	B	640	642	parallel
Strand 3	B	580	588	parallel
Strand 4	B	566	574	anti-parallel
Strand 5	B	780	781	anti-parallel
Strand 6	B	758	761	parallel
Strand 7	B	724	727	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	590	591	first strand
Strand 2	B	595	596	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CE0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CE0