Analysis of interatomic Contacts of Structural Units in PDB entry:
9CE3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CE3 entry

There are 8 chains in PDB entry 9CE3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 35	ASN 1762
B	THR 41	ASN 1762
C	ASN 6	LYS 971
D	ASN 6	LEU 969
E	GLY 18	SER 293
F	HIS 11	MET 315
G	UNK 1	UNK 12
H	UNK 1	UNK 12

There are214 helices in PDB entry 9CE3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	49	Right-handed alpha
Helix 2	AA2	A	53	71	Right-handed alpha
Helix 3	AA3	A	74	87	Right-handed alpha
Helix 4	AA4	A	94	113	Right-handed alpha
Helix 5	AA5	A	114	117	Right-handed 310
Helix 6	AA6	A	118	129	Right-handed alpha
Helix 7	AA7	A	135	148	Right-handed alpha
Helix 8	AA8	A	149	151	Right-handed 310
Helix 9	AA9	A	159	171	Right-handed alpha
Helix 10	AB1	A	173	187	Right-handed alpha
Helix 11	AB2	A	188	193	Right-handed 310
Helix 12	AB3	A	194	209	Right-handed alpha
Helix 13	AB4	A	211	229	Right-handed alpha
Helix 14	AB5	A	232	234	Right-handed 310
Helix 15	AB6	A	235	247	Right-handed alpha
Helix 16	AB7	A	248	251	Right-handed 310
Helix 17	AB8	A	252	265	Right-handed alpha
Helix 18	AB9	A	268	282	Right-handed alpha
Helix 19	AC1	A	283	286	Right-handed 310
Helix 20	AC2	A	288	305	Right-handed alpha
Helix 21	AC3	A	315	318	Right-handed 310
Helix 22	AC4	A	319	327	Right-handed alpha
Helix 23	AC5	A	331	350	Right-handed alpha
Helix 24	AC6	A	354	372	Right-handed alpha
Helix 25	AC7	A	377	397	Right-handed alpha
Helix 26	AC8	A	403	414	Right-handed alpha
Helix 27	AC9	A	415	418	Right-handed 310
Helix 28	AD1	A	419	433	Right-handed alpha
Helix 29	AD2	A	440	454	Right-handed alpha
Helix 30	AD3	A	458	477	Right-handed alpha
Helix 31	AD4	A	480	488	Right-handed alpha
Helix 32	AD5	A	488	494	Right-handed alpha
Helix 33	AD6	A	495	499	Right-handed 310
Helix 34	AD7	A	501	519	Right-handed alpha
Helix 35	AD8	A	523	536	Right-handed alpha
Helix 36	AD9	A	548	555	Right-handed alpha
Helix 37	AE1	A	557	575	Right-handed alpha
Helix 38	AE2	A	580	601	Right-handed alpha
Helix 39	AE3	A	604	619	Right-handed alpha
Helix 40	AE4	A	686	700	Right-handed alpha
Helix 41	AE5	A	702	718	Right-handed alpha
Helix 42	AE6	A	719	726	Right-handed alpha
Helix 43	AE7	A	729	743	Right-handed alpha
Helix 44	AE8	A	744	750	Right-handed alpha
Helix 45	AE9	A	758	774	Right-handed alpha
Helix 46	AF1	A	775	780	Right-handed 310
Helix 47	AF2	A	781	795	Right-handed alpha
Helix 48	AF3	A	796	798	Right-handed 310
Helix 49	AF4	A	800	815	Right-handed alpha
Helix 50	AF5	A	815	832	Right-handed alpha
Helix 51	AF6	A	836	852	Right-handed alpha
Helix 52	AF7	A	861	873	Right-handed alpha
Helix 53	AF8	A	874	877	Right-handed 310
Helix 54	AF9	A	882	900	Right-handed alpha
Helix 55	AG1	A	901	906	Right-handed alpha
Helix 56	AG2	A	907	922	Right-handed alpha
Helix 57	AG3	A	933	937	Right-handed 310
Helix 58	AG4	A	1005	1034	Right-handed alpha
Helix 59	AG5	A	1045	1053	Right-handed alpha
Helix 60	AG6	A	1076	1082	Right-handed alpha
Helix 61	AG7	A	1185	1192	Right-handed alpha
Helix 62	AG8	A	1228	1233	Right-handed alpha
Helix 63	AG9	A	1234	1239	Right-handed 310
Helix 64	AH1	A	1496	1506	Right-handed alpha
Helix 65	AH2	A	1524	1537	Right-handed alpha
Helix 66	AH3	A	1557	1564	Right-handed alpha
Helix 67	AH4	A	1568	1577	Right-handed alpha
Helix 68	AH5	A	1585	1587	Right-handed 310
Helix 69	AH6	A	1623	1625	Right-handed 310
Helix 70	AH7	A	1634	1642	Right-handed alpha
Helix 71	AH8	A	1690	1694	Right-handed 310
Helix 72	AH9	A	1707	1731	Right-handed alpha
Helix 73	AI1	A	1738	1761	Right-handed alpha
Helix 74	AI2	A	1762	1762	Right-handed 310
Helix 75	AI3	B	41	43	Right-handed 310
Helix 76	AI4	B	44	49	Right-handed alpha
Helix 77	AI5	B	53	69	Right-handed alpha
Helix 78	AI6	B	76	86	Right-handed alpha
Helix 79	AI7	B	87	89	Right-handed 310
Helix 80	AI8	B	94	112	Right-handed alpha
Helix 81	AI9	B	113	116	Right-handed 310
Helix 82	AJ1	B	117	129	Right-handed alpha
Helix 83	AJ2	B	136	148	Right-handed alpha
Helix 84	AJ3	B	156	171	Right-handed alpha
Helix 85	AJ4	B	173	188	Right-handed alpha
Helix 86	AJ5	B	189	193	Right-handed 310
Helix 87	AJ6	B	194	207	Right-handed alpha
Helix 88	AJ7	B	211	228	Right-handed alpha
Helix 89	AJ8	B	235	247	Right-handed alpha
Helix 90	AJ9	B	248	251	Right-handed 310
Helix 91	AK1	B	252	265	Right-handed alpha
Helix 92	AK2	B	267	282	Right-handed alpha
Helix 93	AK3	B	283	286	Right-handed 310
Helix 94	AK4	B	288	305	Right-handed alpha
Helix 95	AK5	B	315	326	Right-handed alpha
Helix 96	AK6	B	333	349	Right-handed alpha
Helix 97	AK7	B	354	376	Right-handed alpha
Helix 98	AK8	B	377	397	Right-handed alpha
Helix 99	AK9	B	403	414	Right-handed alpha
Helix 100	AL1	B	420	432	Right-handed alpha
Helix 101	AL2	B	440	453	Right-handed alpha
Helix 102	AL3	B	458	477	Right-handed alpha
Helix 103	AL4	B	480	492	Right-handed alpha
Helix 104	AL5	B	493	496	Right-handed 310
Helix 105	AL6	B	501	519	Right-handed alpha
Helix 106	AL7	B	523	537	Right-handed alpha
Helix 107	AL8	B	546	575	Right-handed alpha
Helix 108	AL9	B	580	601	Right-handed alpha
Helix 109	AM1	B	604	619	Right-handed alpha
Helix 110	AM2	B	685	700	Right-handed alpha
Helix 111	AM3	B	702	717	Right-handed alpha
Helix 112	AM4	B	719	725	Right-handed alpha
Helix 113	AM5	B	729	743	Right-handed alpha
Helix 114	AM6	B	745	750	Right-handed alpha
Helix 115	AM7	B	758	774	Right-handed alpha
Helix 116	AM8	B	775	777	Right-handed 310
Helix 117	AM9	B	781	795	Right-handed alpha
Helix 118	AN1	B	796	799	Right-handed 310
Helix 119	AN2	B	800	815	Right-handed alpha
Helix 120	AN3	B	815	832	Right-handed alpha
Helix 121	AN4	B	836	852	Right-handed alpha
Helix 122	AN5	B	861	873	Right-handed alpha
Helix 123	AN6	B	874	877	Right-handed 310
Helix 124	AN7	B	882	900	Right-handed alpha
Helix 125	AN8	B	901	921	Right-handed alpha
Helix 126	AN9	B	932	937	Right-handed 310
Helix 127	AO1	B	1005	1034	Right-handed alpha
Helix 128	AO2	B	1045	1053	Right-handed alpha
Helix 129	AO3	B	1074	1082	Right-handed alpha
Helix 130	AO4	B	1182	1186	Right-handed 310
Helix 131	AO5	B	1227	1238	Right-handed alpha
Helix 132	AO6	B	1496	1506	Right-handed alpha
Helix 133	AO7	B	1512	1516	Right-handed 310
Helix 134	AO8	B	1524	1537	Right-handed alpha
Helix 135	AO9	B	1557	1563	Right-handed alpha
Helix 136	AP1	B	1568	1577	Right-handed alpha
Helix 137	AP2	B	1585	1587	Right-handed 310
Helix 138	AP3	B	1634	1642	Right-handed alpha
Helix 139	AP4	B	1707	1731	Right-handed alpha
Helix 140	AP5	B	1738	1762	Right-handed alpha
Helix 141	AP6	C	7	13	Right-handed alpha
Helix 142	AP7	C	18	36	Right-handed alpha
Helix 143	AP8	C	39	53	Right-handed alpha
Helix 144	AP9	C	54	63	Right-handed alpha
Helix 145	AQ1	C	67	82	Right-handed alpha
Helix 146	AQ2	C	85	99	Right-handed alpha
Helix 147	AQ3	C	101	109	Right-handed 310
Helix 148	AQ4	C	111	122	Right-handed alpha
Helix 149	AQ5	C	125	140	Right-handed alpha
Helix 150	AQ6	C	143	145	Right-handed 310
Helix 151	AQ7	C	146	168	Right-handed alpha
Helix 152	AQ8	C	173	195	Right-handed alpha
Helix 153	AQ9	C	195	208	Right-handed alpha
Helix 154	AR1	C	212	225	Right-handed alpha
Helix 155	AR2	C	231	236	Right-handed alpha
Helix 156	AR3	C	237	243	Right-handed alpha
Helix 157	AR4	C	243	248	Right-handed alpha
Helix 158	AR5	C	251	261	Right-handed alpha
Helix 159	AR6	C	604	612	Right-handed alpha
Helix 160	AR7	C	612	620	Right-handed alpha
Helix 161	AR8	C	655	663	Right-handed alpha
Helix 162	AR9	C	668	674	Right-handed alpha
Helix 163	AS1	C	675	679	Right-handed 310
Helix 164	AS2	C	684	794	Right-handed alpha
Helix 165	AS3	C	794	867	Right-handed alpha
Helix 166	AS4	C	868	872	Right-handed 310
Helix 167	AS5	C	873	970	Right-handed alpha
Helix 168	AS6	D	7	15	Right-handed alpha
Helix 169	AS7	D	18	36	Right-handed alpha
Helix 170	AS8	D	39	53	Right-handed alpha
Helix 171	AS9	D	54	63	Right-handed alpha
Helix 172	AT1	D	67	82	Right-handed alpha
Helix 173	AT2	D	85	99	Right-handed alpha
Helix 174	AT3	D	103	109	Right-handed 310
Helix 175	AT4	D	111	123	Right-handed alpha
Helix 176	AT5	D	125	140	Right-handed alpha
Helix 177	AT6	D	143	145	Right-handed 310
Helix 178	AT7	D	146	168	Right-handed alpha
Helix 179	AT8	D	173	195	Right-handed alpha
Helix 180	AT9	D	195	208	Right-handed alpha
Helix 181	AU1	D	209	211	Right-handed 310
Helix 182	AU2	D	212	224	Right-handed alpha
Helix 183	AU3	D	225	227	Right-handed 310
Helix 184	AU4	D	231	236	Right-handed alpha
Helix 185	AU5	D	238	242	Right-handed 310
Helix 186	AU6	D	243	249	Right-handed alpha
Helix 187	AU7	D	251	262	Right-handed alpha
Helix 188	AU8	D	616	632	Right-handed alpha
Helix 189	AU9	D	646	667	Right-handed alpha
Helix 190	AV1	D	689	728	Right-handed alpha
Helix 191	AV2	D	730	742	Right-handed alpha
Helix 192	AV3	D	743	779	Right-handed alpha
Helix 193	AV4	D	779	789	Right-handed alpha
Helix 194	AV5	D	789	808	Right-handed alpha
Helix 195	AV6	D	808	831	Right-handed alpha
Helix 196	AV7	D	840	867	Right-handed alpha
Helix 197	AV8	D	874	968	Right-handed alpha
Helix 198	AV9	E	19	34	Right-handed alpha
Helix 199	AW1	E	38	49	Right-handed alpha
Helix 200	AW2	E	52	64	Right-handed alpha
Helix 201	AW3	E	70	72	Right-handed 310
Helix 202	AW4	E	73	95	Right-handed alpha
Helix 203	AW5	E	103	116	Right-handed alpha
Helix 204	AW6	E	128	145	Right-handed alpha
Helix 205	AW7	E	147	164	Right-handed alpha
Helix 206	AW8	E	168	195	Right-handed alpha
Helix 207	AW9	E	197	201	Right-handed 310
Helix 208	AX1	E	202	208	Right-handed alpha
Helix 209	AX2	E	216	229	Right-handed alpha
Helix 210	AX3	E	232	246	Right-handed alpha
Helix 211	AX4	E	246	251	Right-handed alpha
Helix 212	AX5	E	255	265	Right-handed alpha
Helix 213	AX6	E	270	286	Right-handed alpha
Helix 214	AX7	F	313	315	Right-handed 310

There are 13 sheets in PDB entry 9CE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	622	623	first strand
Strand 2	A	628	632	anti-parallel
Strand 3	A	638	645	anti-parallel
Strand 4	A	682	683	parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1518	1519	first strand
Strand 2	A	1056	1061	anti-parallel
Strand 3	A	1066	1071	anti-parallel
Strand 4	A	1194	1201	anti-parallel
Strand 5	A	1204	1212	anti-parallel
Strand 6	B	1204	1212	anti-parallel
Strand 7	B	1194	1201	anti-parallel
Strand 8	B	1066	1071	anti-parallel
Strand 9	B	1056	1061	anti-parallel
Strand 10	B	1518	1519	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1580	1583	first strand
Strand 2	A	1606	1611	anti-parallel
Strand 3	A	1615	1621	anti-parallel
Strand 4	A	1541	1550	parallel
Strand 5	A	1646	1651	parallel
Strand 6	A	1669	1676	parallel
Strand 7	A	1680	1687	anti-parallel
Strand 8	A	1700	1704	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	622	623	first strand
Strand 2	B	628	632	anti-parallel
Strand 3	B	638	645	anti-parallel
Strand 4	B	682	683	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1580	1583	first strand
Strand 2	B	1606	1611	anti-parallel
Strand 3	B	1615	1621	anti-parallel
Strand 4	B	1541	1550	parallel
Strand 5	B	1646	1651	parallel
Strand 6	B	1669	1676	parallel
Strand 7	B	1686	1687	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1580	1583	first strand
Strand 2	B	1606	1611	anti-parallel
Strand 3	B	1615	1621	anti-parallel
Strand 4	B	1541	1550	parallel
Strand 5	B	1646	1651	parallel
Strand 6	B	1669	1676	parallel
Strand 7	B	1680	1683	anti-parallel
Strand 8	B	1701	1704	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	18	first strand
Strand 2	F	24	29	anti-parallel
Strand 3	F	32	37	anti-parallel
Strand 4	F	42	48	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	58	first strand
Strand 2	F	65	69	anti-parallel
Strand 3	F	75	80	anti-parallel
Strand 4	F	85	91	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	102	first strand
Strand 2	F	105	110	anti-parallel
Strand 3	F	113	118	anti-parallel
Strand 4	F	125	130	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	140	141	first strand
Strand 2	F	149	153	anti-parallel
Strand 3	F	160	164	anti-parallel
Strand 4	F	173	175	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	187	first strand
Strand 2	F	193	198	anti-parallel
Strand 3	F	203	208	anti-parallel
Strand 4	F	214	219	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	229	232	first strand
Strand 2	F	238	243	anti-parallel
Strand 3	F	247	252	anti-parallel
Strand 4	F	263	266	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	273	277	first strand
Strand 2	F	283	288	anti-parallel
Strand 3	F	292	298	anti-parallel
Strand 4	F	304	311	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CE3

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CE3