Analysis of interatomic Contacts of Structural Units in PDB entry:
9CEL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CEL entry

There are 4 chains in PDB entry 9CEL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1508VAL 1778
B
 GLY 1508VAL 1778
C
 GLY 1508VAL 1778
D
 GLY 1508VAL 1778
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 9CEL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1509 1520Right-handed alpha
Helix 2
AA2
A
1523 1536Right-handed alpha
Helix 3
AA3
A
1543 1547Right-handed 310
Helix 4
AA4
A
1576 1579Right-handed 310
Helix 5
AA5
A
1580 1588Right-handed alpha
Helix 6
AA6
A
1610 1626Right-handed alpha
Helix 7
AA7
A
1637 1653Right-handed alpha
Helix 8
AA8
A
1694 1709Right-handed alpha
Helix 9
AA9
A
1757 1761Right-handed 310
Helix 10
AB1
A
1763 1776Right-handed alpha
Helix 11
AB2
B
1509 1521Right-handed alpha
Helix 12
AB3
B
1523 1536Right-handed alpha
Helix 13
AB4
B
1544 1548Right-handed 310
Helix 14
AB5
B
1576 1579Right-handed 310
Helix 15
AB6
B
1580 1588Right-handed alpha
Helix 16
AB7
B
1610 1627Right-handed alpha
Helix 17
AB8
B
1637 1653Right-handed alpha
Helix 18
AB9
B
1694 1708Right-handed alpha
Helix 19
AC1
B
1757 1761Right-handed 310
Helix 20
AC2
B
1763 1778Right-handed alpha
Helix 21
AC3
C
1509 1521Right-handed alpha
Helix 22
AC4
C
1523 1536Right-handed alpha
Helix 23
AC5
C
1543 1548Right-handed 310
Helix 24
AC6
C
1576 1579Right-handed 310
Helix 25
AC7
C
1580 1587Right-handed alpha
Helix 26
AC8
C
1610 1627Right-handed alpha
Helix 27
AC9
C
1637 1653Right-handed alpha
Helix 28
AD1
C
1676 1686Right-handed alpha
Helix 29
AD2
C
1694 1709Right-handed alpha
Helix 30
AD3
C
1757 1761Right-handed 310
Helix 31
AD4
C
1763 1776Right-handed alpha
Helix 32
AD5
D
1509 1521Right-handed alpha
Helix 33
AD6
D
1523 1536Right-handed alpha
Helix 34
AD7
D
1576 1579Right-handed 310
Helix 35
AD8
D
1580 1587Right-handed alpha
Helix 36
AD9
D
1610 1627Right-handed alpha
Helix 37
AE1
D
1637 1653Right-handed alpha
Helix 38
AE2
D
1676 1686Right-handed alpha
Helix 39
AE3
D
1694 1708Right-handed alpha
Helix 40
AE4
D
1709 1711Right-handed 310
Helix 41
AE5
D
1757 1761Right-handed 310
Helix 42
AE6
D
1763 1777Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 9CEL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1540 1541first strand
Strand 2
A
1607 1608parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1554 1557first strand
Strand 2
A
1592 1596anti-parallel
Strand 3
A
1564 1568parallel
Strand 4
A
1631 1636parallel
Strand 5
A
1659 1663parallel
Strand 6
A
1720 1725parallel
Strand 7
A
1748 1752parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1540 1541first strand
Strand 2
B
1607 1608parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1554 1557first strand
Strand 2
B
1593 1596anti-parallel
Strand 3
B
1564 1568parallel
Strand 4
B
1631 1636parallel
Strand 5
B
1659 1663parallel
Strand 6
B
1720 1725parallel
Strand 7
B
1748 1752parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1540 1541first strand
Strand 2
C
1607 1608parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1554 1557first strand
Strand 2
C
1593 1596anti-parallel
Strand 3
C
1564 1568parallel
Strand 4
C
1631 1636parallel
Strand 5
C
1659 1663parallel
Strand 6
C
1720 1727parallel
Strand 7
C
1748 1755parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1540 1541first strand
Strand 2
D
1607 1608parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1554 1557first strand
Strand 2
D
1593 1596anti-parallel
Strand 3
D
1564 1568parallel
Strand 4
D
1631 1636parallel
Strand 5
D
1659 1663parallel
Strand 6
D
1720 1725parallel
Strand 7
D
1748 1752parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il