Analysis of interatomic Contacts of Structural Units in PDB entry:
9CG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CG1 entry

There is 1 chain in PDB entry 9CG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 9CG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 17Right-handed alpha
Helix 2
AA2
A
35 43Right-handed alpha
Helix 3
AA3
A
95 99Right-handed 310
Helix 4
AA4
A
104 109Right-handed 310
Helix 5
AA5
A
114 121Right-handed alpha
Helix 6
AA6
A
130 141Right-handed alpha
Helix 7
AA7
A
153 162Right-handed alpha
Helix 8
AA8
A
165 167Right-handed 310
Helix 9
AA9
A
168 179Right-handed alpha
Helix 10
AB1
A
196 208Right-handed alpha
Helix 11
AB2
A
237 260Right-handed alpha
Helix 12
AB3
A
267 275Right-handed alpha
Helix 13
AB4
A
280 285Right-handed 310
Helix 14
AB5
A
289 293Right-handed 310
Helix 15
AB6
A
295 308Right-handed alpha
Helix 16
AB7
A
309 311Right-handed 310
Helix 17
AB8
A
327 342Right-handed alpha
Helix 18
AB9
A
363 367Right-handed 310
Helix 19
AC1
A
368 376Right-handed alpha
Helix 20
AC2
A
390 392Right-handed 310
Helix 21
AC3
A
400 404Right-handed 310
Helix 22
AC4
A
411 420Right-handed alpha
Helix 23
AC5
A
432 440Right-handed alpha
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There are 3 sheets in PDB entry 9CG1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 65first strand
Strand 2
A
47 53anti-parallel
Strand 3
A
24 28anti-parallel
Strand 4
A
3 8anti-parallel
Strand 5
A
74 76anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 148first strand
Strand 2
A
183 189parallel
Strand 3
A
213 220parallel
Strand 4
A
264 266parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 351first strand
Strand 2
A
317 323parallel
Strand 3
A
384 388parallel
Strand 4
A
422 426parallel
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