Analysis of interatomic Contacts of Structural Units in PDB entry:
9CG2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CG2 entry

There is 1 chain in PDB entry 9CG2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0SER 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9CG2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
46 50Right-handed 310
Helix 3
AA3
A
63 67Right-handed 310
Helix 4
AA4
A
69 81Right-handed alpha
Helix 5
AA5
A
97 108Right-handed alpha
Helix 6
AA6
A
120 129Right-handed alpha
Helix 7
AA7
A
133 147Right-handed alpha
Helix 8
AA8
A
163 174Right-handed alpha
Helix 9
AA9
A
198 214Right-handed alpha
Helix 10
AB1
A
223 231Right-handed alpha
Helix 11
AB2
A
256 264Right-handed alpha
Helix 12
AB3
A
283 287Right-handed 310
Helix 13
AB4
A
288 298Right-handed alpha
Helix 14
AB5
A
312 314Right-handed 310
Helix 15
AB6
A
324 337Right-handed alpha
Helix 16
AB7
A
345 347Right-handed 310
Helix 17
AB8
A
348 357Right-handed alpha
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There are 2 sheets in PDB entry 9CG2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
1 4anti-parallel
Strand 3
A
27 29parallel
Strand 4
A
84 90parallel
Strand 5
A
111 115parallel
Strand 6
A
148 155parallel
Strand 7
A
178 183parallel
Strand 8
A
219 221parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 272first strand
Strand 2
A
248 253parallel
Strand 3
A
306 310parallel
Strand 4
A
339 343parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il