Analysis of interatomic Contacts of Structural Units in PDB entry:
9CI2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CI2 entry

There are 24 chains in PDB entry 9CI2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	GLY 64	GLU 136
2	GLY 64	GLU 136
3	GLY 64	GLU 136
4	GLY 64	GLU 136
A	LEU 22	THR 200
A	ASP 202	LEU 475
B	GLY 12	THR 200
B	ASP 202	LYS 466
C	LEU 22	THR 200
C	ASP 202	LEU 475
D	GLY 12	THR 200
D	ASP 202	LYS 466
E	LEU 22	THR 200
E	ASP 202	LEU 475
F	GLY 12	THR 200
F	ASP 202	LYS 466
G	LEU 22	THR 200
G	ASP 202	LEU 475
H	GLY 12	THR 200
H	ASP 202	LYS 466
I	MET 1	PRO 118
J	MET 1	PRO 118
K	MET 1	PRO 118
L	MET 1	PRO 118

There are157 helices in PDB entry 9CI2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	61	Right-handed alpha
Helix 2	AA2	A	104	108	Right-handed 310
Helix 3	AA3	A	112	121	Right-handed alpha
Helix 4	AA4	A	141	146	Right-handed alpha
Helix 5	AA5	A	155	163	Right-handed alpha
Helix 6	AA6	A	181	194	Right-handed alpha
Helix 7	AA7	A	213	233	Right-handed alpha
Helix 8	AA8	A	246	261	Right-handed alpha
Helix 9	AA9	A	273	288	Right-handed alpha
Helix 10	AB1	A	297	301	Right-handed 310
Helix 11	AB2	A	310	322	Right-handed alpha
Helix 12	AB3	A	338	348	Right-handed alpha
Helix 13	AB4	A	383	385	Right-handed 310
Helix 14	AB5	A	386	394	Right-handed alpha
Helix 15	AB6	A	403	408	Right-handed alpha
Helix 16	AB7	A	412	433	Right-handed alpha
Helix 17	AB8	A	441	449	Right-handed alpha
Helix 18	AB9	A	452	462	Right-handed alpha
Helix 19	AC1	B	49	60	Right-handed alpha
Helix 20	AC2	B	104	108	Right-handed 310
Helix 21	AC3	B	112	121	Right-handed alpha
Helix 22	AC4	B	123	127	Right-handed 310
Helix 23	AC5	B	144	148	Right-handed 310
Helix 24	AC6	B	155	163	Right-handed alpha
Helix 25	AC7	B	181	196	Right-handed alpha
Helix 26	AC8	B	213	233	Right-handed alpha
Helix 27	AC9	B	246	260	Right-handed alpha
Helix 28	AD1	B	273	288	Right-handed alpha
Helix 29	AD2	B	297	301	Right-handed 310
Helix 30	AD3	B	310	322	Right-handed alpha
Helix 31	AD4	B	339	351	Right-handed alpha
Helix 32	AD5	B	357	361	Right-handed 310
Helix 33	AD6	B	383	385	Right-handed 310
Helix 34	AD7	B	386	395	Right-handed alpha
Helix 35	AD8	B	413	432	Right-handed alpha
Helix 36	AD9	B	441	449	Right-handed alpha
Helix 37	AE1	B	450	452	Right-handed 310
Helix 38	AE2	B	454	462	Right-handed alpha
Helix 39	AE3	C	49	63	Right-handed alpha
Helix 40	AE4	C	104	108	Right-handed 310
Helix 41	AE5	C	112	121	Right-handed alpha
Helix 42	AE6	C	141	146	Right-handed alpha
Helix 43	AE7	C	155	163	Right-handed alpha
Helix 44	AE8	C	181	194	Right-handed alpha
Helix 45	AE9	C	213	233	Right-handed alpha
Helix 46	AF1	C	246	261	Right-handed alpha
Helix 47	AF2	C	273	288	Right-handed alpha
Helix 48	AF3	C	297	301	Right-handed 310
Helix 49	AF4	C	310	322	Right-handed alpha
Helix 50	AF5	C	338	351	Right-handed alpha
Helix 51	AF6	C	383	385	Right-handed 310
Helix 52	AF7	C	386	394	Right-handed alpha
Helix 53	AF8	C	403	408	Right-handed alpha
Helix 54	AF9	C	412	433	Right-handed alpha
Helix 55	AG1	C	441	449	Right-handed alpha
Helix 56	AG2	C	452	462	Right-handed alpha
Helix 57	AG3	D	49	60	Right-handed alpha
Helix 58	AG4	D	112	121	Right-handed alpha
Helix 59	AG5	D	123	127	Right-handed 310
Helix 60	AG6	D	144	148	Right-handed 310
Helix 61	AG7	D	155	163	Right-handed alpha
Helix 62	AG8	D	181	196	Right-handed alpha
Helix 63	AG9	D	213	233	Right-handed alpha
Helix 64	AH1	D	246	260	Right-handed alpha
Helix 65	AH2	D	273	288	Right-handed alpha
Helix 66	AH3	D	297	301	Right-handed 310
Helix 67	AH4	D	310	322	Right-handed alpha
Helix 68	AH5	D	339	351	Right-handed alpha
Helix 69	AH6	D	383	385	Right-handed 310
Helix 70	AH7	D	386	395	Right-handed alpha
Helix 71	AH8	D	403	408	Right-handed alpha
Helix 72	AH9	D	413	432	Right-handed alpha
Helix 73	AI1	D	441	449	Right-handed alpha
Helix 74	AI2	D	450	452	Right-handed 310
Helix 75	AI3	D	454	462	Right-handed alpha
Helix 76	AI4	E	49	61	Right-handed alpha
Helix 77	AI5	E	104	108	Right-handed 310
Helix 78	AI6	E	112	121	Right-handed alpha
Helix 79	AI7	E	141	146	Right-handed alpha
Helix 80	AI8	E	155	163	Right-handed alpha
Helix 81	AI9	E	181	194	Right-handed alpha
Helix 82	AJ1	E	213	233	Right-handed alpha
Helix 83	AJ2	E	246	261	Right-handed alpha
Helix 84	AJ3	E	273	288	Right-handed alpha
Helix 85	AJ4	E	297	301	Right-handed 310
Helix 86	AJ5	E	310	322	Right-handed alpha
Helix 87	AJ6	E	338	351	Right-handed alpha
Helix 88	AJ7	E	383	385	Right-handed 310
Helix 89	AJ8	E	386	394	Right-handed alpha
Helix 90	AJ9	E	403	408	Right-handed alpha
Helix 91	AK1	E	412	433	Right-handed alpha
Helix 92	AK2	E	441	450	Right-handed alpha
Helix 93	AK3	E	452	462	Right-handed alpha
Helix 94	AK4	F	49	60	Right-handed alpha
Helix 95	AK5	F	104	108	Right-handed 310
Helix 96	AK6	F	112	121	Right-handed alpha
Helix 97	AK7	F	144	148	Right-handed 310
Helix 98	AK8	F	155	163	Right-handed alpha
Helix 99	AK9	F	181	196	Right-handed alpha
Helix 100	AL1	F	213	233	Right-handed alpha
Helix 101	AL2	F	246	260	Right-handed alpha
Helix 102	AL3	F	273	288	Right-handed alpha
Helix 103	AL4	F	297	301	Right-handed 310
Helix 104	AL5	F	310	322	Right-handed alpha
Helix 105	AL6	F	339	351	Right-handed alpha
Helix 106	AL7	F	383	385	Right-handed 310
Helix 107	AL8	F	386	395	Right-handed alpha
Helix 108	AL9	F	403	408	Right-handed alpha
Helix 109	AM1	F	413	432	Right-handed alpha
Helix 110	AM2	F	441	449	Right-handed alpha
Helix 111	AM3	F	450	452	Right-handed 310
Helix 112	AM4	G	49	61	Right-handed alpha
Helix 113	AM5	G	104	108	Right-handed 310
Helix 114	AM6	G	112	121	Right-handed alpha
Helix 115	AM7	G	141	146	Right-handed alpha
Helix 116	AM8	G	155	163	Right-handed alpha
Helix 117	AM9	G	181	194	Right-handed alpha
Helix 118	AN1	G	213	233	Right-handed alpha
Helix 119	AN2	G	246	261	Right-handed alpha
Helix 120	AN3	G	273	288	Right-handed alpha
Helix 121	AN4	G	297	301	Right-handed 310
Helix 122	AN5	G	310	322	Right-handed alpha
Helix 123	AN6	G	338	351	Right-handed alpha
Helix 124	AN7	G	383	385	Right-handed 310
Helix 125	AN8	G	386	394	Right-handed alpha
Helix 126	AN9	G	403	408	Right-handed alpha
Helix 127	AO1	G	412	434	Right-handed alpha
Helix 128	AO2	G	441	450	Right-handed alpha
Helix 129	AO3	G	452	462	Right-handed alpha
Helix 130	AO4	H	49	60	Right-handed alpha
Helix 131	AO5	H	106	108	Right-handed 310
Helix 132	AO6	H	112	121	Right-handed alpha
Helix 133	AO7	H	123	127	Right-handed 310
Helix 134	AO8	H	144	148	Right-handed 310
Helix 135	AO9	H	155	163	Right-handed alpha
Helix 136	AP1	H	181	196	Right-handed alpha
Helix 137	AP2	H	213	233	Right-handed alpha
Helix 138	AP3	H	246	260	Right-handed alpha
Helix 139	AP4	H	273	288	Right-handed alpha
Helix 140	AP5	H	297	301	Right-handed 310
Helix 141	AP6	H	310	322	Right-handed alpha
Helix 142	AP7	H	339	351	Right-handed alpha
Helix 143	AP8	H	383	385	Right-handed 310
Helix 144	AP9	H	386	395	Right-handed alpha
Helix 145	AQ1	H	403	408	Right-handed alpha
Helix 146	AQ2	H	413	432	Right-handed alpha
Helix 147	AQ3	H	441	449	Right-handed alpha
Helix 148	AQ4	H	450	452	Right-handed 310
Helix 149	AQ5	H	454	462	Right-handed alpha
Helix 150	AQ6	I	22	36	Right-handed alpha
Helix 151	AQ7	I	78	92	Right-handed alpha
Helix 152	AQ8	J	22	36	Right-handed alpha
Helix 153	AQ9	J	78	92	Right-handed alpha
Helix 154	AR1	K	22	36	Right-handed alpha
Helix 155	AR2	K	78	92	Right-handed alpha
Helix 156	AR3	L	22	36	Right-handed alpha
Helix 157	AR4	L	77	92	Right-handed alpha

There are 40 sheets in PDB entry 9CI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	65	66	first strand
Strand 2	1	69	72	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	80	81	first strand
Strand 2	1	116	117	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	65	66	first strand
Strand 2	2	69	72	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	80	81	first strand
Strand 2	2	116	117	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	65	66	first strand
Strand 2	3	69	72	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	80	81	first strand
Strand 2	3	116	117	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	65	66	first strand
Strand 2	4	69	72	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	80	81	first strand
Strand 2	4	116	117	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	89	first strand
Strand 2	A	97	103	anti-parallel
Strand 3	A	36	44	anti-parallel
Strand 4	A	130	139	anti-parallel
Strand 5	A	308	309	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	201	first strand
Strand 2	A	169	173	parallel
Strand 3	A	399	401	parallel
Strand 4	A	375	378	parallel
Strand 5	A	325	327	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	241	first strand
Strand 2	A	264	268	parallel
Strand 3	A	290	294	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	354	first strand
Strand 2	A	366	367	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	89	first strand
Strand 2	B	97	103	anti-parallel
Strand 3	B	36	44	anti-parallel
Strand 4	B	130	139	anti-parallel
Strand 5	B	308	309	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	172	first strand
Strand 2	B	399	402	parallel
Strand 3	B	375	378	parallel
Strand 4	B	325	327	parallel
Strand 5	B	290	294	parallel
Strand 6	B	264	268	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	354	first strand
Strand 2	B	366	367	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	89	first strand
Strand 2	C	97	103	anti-parallel
Strand 3	C	36	44	anti-parallel
Strand 4	C	130	139	anti-parallel
Strand 5	C	308	309	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	171	first strand
Strand 2	C	399	401	parallel
Strand 3	C	375	378	parallel
Strand 4	C	325	327	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	241	first strand
Strand 2	C	264	268	parallel
Strand 3	C	290	294	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	354	first strand
Strand 2	C	366	367	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	89	first strand
Strand 2	D	97	103	anti-parallel
Strand 3	D	36	44	anti-parallel
Strand 4	D	130	139	anti-parallel
Strand 5	D	308	309	parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	172	first strand
Strand 2	D	399	402	parallel
Strand 3	D	375	378	parallel
Strand 4	D	325	327	parallel
Strand 5	D	290	294	parallel
Strand 6	D	264	268	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	353	354	first strand
Strand 2	D	366	367	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	89	first strand
Strand 2	E	97	103	anti-parallel
Strand 3	E	36	44	anti-parallel
Strand 4	E	130	139	anti-parallel
Strand 5	E	308	309	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	171	first strand
Strand 2	E	399	401	parallel
Strand 3	E	375	378	parallel
Strand 4	E	325	327	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	241	first strand
Strand 2	E	264	268	parallel
Strand 3	E	290	294	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	353	354	first strand
Strand 2	E	366	367	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	89	first strand
Strand 2	F	97	103	anti-parallel
Strand 3	F	36	44	anti-parallel
Strand 4	F	130	139	anti-parallel
Strand 5	F	308	309	parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	172	first strand
Strand 2	F	399	402	parallel
Strand 3	F	375	378	parallel
Strand 4	F	325	327	parallel
Strand 5	F	290	294	parallel
Strand 6	F	264	268	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	353	354	first strand
Strand 2	F	366	367	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	83	89	first strand
Strand 2	G	97	103	anti-parallel
Strand 3	G	36	44	anti-parallel
Strand 4	G	130	139	anti-parallel
Strand 5	G	308	309	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	171	first strand
Strand 2	G	399	401	parallel
Strand 3	G	375	378	parallel
Strand 4	G	325	327	parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	241	first strand
Strand 2	G	264	268	parallel
Strand 3	G	290	294	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	353	354	first strand
Strand 2	G	366	367	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	83	89	first strand
Strand 2	H	97	104	anti-parallel
Strand 3	H	35	44	anti-parallel
Strand 4	H	130	139	anti-parallel
Strand 5	H	308	309	parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	172	first strand
Strand 2	H	399	402	parallel
Strand 3	H	375	378	parallel
Strand 4	H	325	327	parallel
Strand 5	H	290	294	parallel
Strand 6	H	264	268	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	353	354	first strand
Strand 2	H	366	367	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	67	first strand
Strand 2	I	41	45	anti-parallel
Strand 3	I	96	103	anti-parallel
Strand 4	I	108	116	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	67	first strand
Strand 2	J	41	45	anti-parallel
Strand 3	J	96	103	anti-parallel
Strand 4	J	108	116	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	66	67	first strand
Strand 2	K	41	45	anti-parallel
Strand 3	K	96	103	anti-parallel
Strand 4	K	108	116	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	66	67	first strand
Strand 2	L	41	45	anti-parallel
Strand 3	L	96	103	anti-parallel
Strand 4	L	108	116	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CI2

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CI2