Analysis of interatomic Contacts of Structural Units in PDB entry:
9CMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CMR entry

There is 1 chain in PDB entry 9CMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2850GLY 3261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9CMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2852 2870Right-handed alpha
Helix 2
AA2
A
2871 2874Right-handed 310
Helix 3
AA3
A
2878 2884Right-handed alpha
Helix 4
AA4
A
2885 2888Right-handed 310
Helix 5
AA5
A
2889 2901Right-handed alpha
Helix 6
AA6
A
2916 2918Right-handed 310
Helix 7
AA7
A
2919 2928Right-handed alpha
Helix 8
AA8
A
2932 2938Right-handed alpha
Helix 9
AA9
A
2954 2969Right-handed alpha
Helix 10
AB1
A
2970 2974Right-handed 310
Helix 11
AB2
A
2991 2995Right-handed 310
Helix 12
AB3
A
2998 3015Right-handed alpha
Helix 13
AB4
A
3024 3032Right-handed alpha
Helix 14
AB5
A
3037 3045Right-handed alpha
Helix 15
AB6
A
3045 3058Right-handed alpha
Helix 16
AB7
A
3096 3110Right-handed alpha
Helix 17
AB8
A
3113 3126Right-handed alpha
Helix 18
AB9
A
3129 3134Right-handed alpha
Helix 19
AC1
A
3137 3146Right-handed alpha
Helix 20
AC2
A
3152 3159Right-handed alpha
Helix 21
AC3
A
3169 3180Right-handed alpha
Helix 22
AC4
A
3183 3195Right-handed alpha
Helix 23
AC5
A
3204 3208Right-handed 310
Helix 24
AC6
A
3246 3260Right-handed alpha
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There are 4 sheets in PDB entry 9CMR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2910 2915first strand
Strand 2
A
2940 2945parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2976 2978first strand
Strand 2
A
2986 2988anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3069 3073first strand
Strand 2
A
3078 3082anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3160 3162first strand
Strand 2
A
3217 3221parallel
Strand 3
A
3238 3241parallel
Strand 4
A
3231 3233anti-parallel
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