Analysis of interatomic Contacts of Structural Units in PDB entry:
9CR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CR8 entry

There is 1 chain in PDB entry 9CR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 33ILE 1230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9CR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 63Right-handed alpha
Helix 2
AA2
A
64 81Right-handed alpha
Helix 3
AA3
A
107 156Right-handed alpha
Helix 4
AA4
A
159 164Right-handed alpha
Helix 5
AA5
A
167 186Right-handed alpha
Helix 6
AA6
A
188 210Right-handed alpha
Helix 7
AA7
A
211 222Right-handed alpha
Helix 8
AA8
A
223 241Right-handed alpha
Helix 9
AA9
A
243 260Right-handed alpha
Helix 10
AB1
A
260 268Right-handed alpha
Helix 11
AB2
A
269 315Right-handed alpha
Helix 12
AB3
A
329 345Right-handed alpha
Helix 13
AB4
A
348 371Right-handed alpha
Helix 14
AB5
A
434 441Right-handed alpha
Helix 15
AB6
A
459 461Right-handed 310
Helix 16
AB7
A
462 467Right-handed alpha
Helix 17
AB8
A
468 470Right-handed 310
Helix 18
AB9
A
483 490Right-handed alpha
Helix 19
AC1
A
496 506Right-handed alpha
Helix 20
AC2
A
509 516Right-handed alpha
Helix 21
AC3
A
532 548Right-handed alpha
Helix 22
AC4
A
565 578Right-handed alpha
Helix 23
AC5
A
699 703Right-handed 310
Helix 24
AC6
A
707 736Right-handed alpha
Helix 25
AC7
A
737 739Right-handed 310
Helix 26
AC8
A
752 799Right-handed alpha
Helix 27
AC9
A
800 806Right-handed alpha
Helix 28
AD1
A
810 820Right-handed alpha
Helix 29
AD2
A
825 854Right-handed alpha
Helix 30
AD3
A
855 890Right-handed alpha
Helix 31
AD4
A
891 903Right-handed alpha
Helix 32
AD5
A
903 911Right-handed alpha
Helix 33
AD6
A
912 965Right-handed alpha
Helix 34
AD7
A
970 994Right-handed alpha
Helix 35
AD8
A
999 1012Right-handed alpha
Helix 36
AD9
A
1078 1084Right-handed alpha
Helix 37
AE1
A
1105 1111Right-handed alpha
Helix 38
AE2
A
1126 1133Right-handed alpha
Helix 39
AE3
A
1141 1152Right-handed alpha
Helix 40
AE4
A
1154 1161Right-handed alpha
Helix 41
AE5
A
1177 1193Right-handed alpha
Helix 42
AE6
A
1210 1222Right-handed alpha
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There are 4 sheets in PDB entry 9CR8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 416first strand
Strand 2
A
393 400anti-parallel
Strand 3
A
451 453anti-parallel
Strand 4
A
456 457anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 552first strand
Strand 2
A
581 583parallel
Strand 3
A
422 426parallel
Strand 4
A
597 600parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1035 1041first strand
Strand 2
A
1091 1096anti-parallel
Strand 3
A
1099 1100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1065 1067first strand
Strand 2
A
1226 1229parallel
Strand 3
A
1196 1199parallel
Strand 4
A
1114 1116parallel
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