Analysis of interatomic Contacts of Structural Units in PDB entry:
9CRZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CRZ entry

There are 2 chains in PDB entry 9CRZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3LEU 324
B
 ASN 3LEU 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9CRZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 29Right-handed alpha
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
48 55Right-handed 310
Helix 4
AA4
A
58 62Right-handed 310
Helix 5
AA5
A
63 83Right-handed alpha
Helix 6
AA6
A
101 113Right-handed alpha
Helix 7
AA7
A
127 131Right-handed 310
Helix 8
AA8
A
134 139Right-handed alpha
Helix 9
AA9
A
164 179Right-handed alpha
Helix 10
AB1
A
183 191Right-handed alpha
Helix 11
AB2
A
259 270Right-handed alpha
Helix 12
AB3
A
288 292Right-handed 310
Helix 13
AB4
A
309 322Right-handed alpha
Helix 14
AB5
B
14 29Right-handed alpha
Helix 15
AB6
B
40 44Right-handed 310
Helix 16
AB7
B
48 55Right-handed 310
Helix 17
AB8
B
58 62Right-handed 310
Helix 18
AB9
B
63 83Right-handed alpha
Helix 19
AC1
B
101 112Right-handed alpha
Helix 20
AC2
B
132 139Right-handed alpha
Helix 21
AC3
B
164 177Right-handed alpha
Helix 22
AC4
B
183 191Right-handed alpha
Helix 23
AC5
B
259 270Right-handed alpha
Helix 24
AC6
B
288 292Right-handed 310
Helix 25
AC7
B
309 322Right-handed alpha
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There are 10 sheets in PDB entry 9CRZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
5 10parallel
Strand 3
A
89 93parallel
Strand 4
A
160 163anti-parallel
Strand 5
A
119 121anti-parallel
Strand 6
A
196 199parallel
Strand 7
A
145 148anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
203 204anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
300 301parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 244first strand
Strand 2
A
304 308anti-parallel
Strand 3
A
275 277anti-parallel
Strand 4
A
281 283anti-parallel
Strand 5
A
252 255anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
293 294anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
5 10parallel
Strand 3
B
89 93parallel
Strand 4
B
160 163anti-parallel
Strand 5
B
119 121anti-parallel
Strand 6
B
196 199parallel
Strand 7
B
145 148anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 98first strand
Strand 2
B
203 204anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 232first strand
Strand 2
B
300 301parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
240 244first strand
Strand 2
B
304 308anti-parallel
Strand 3
B
275 277anti-parallel
Strand 4
B
281 283anti-parallel
Strand 5
B
252 255anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
293 294anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il