Analysis of interatomic Contacts of Structural Units in PDB entry:
9CTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CTC entry

There is 1 chain in PDB entry 9CTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 30SER 1272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9CTC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 40Right-handed alpha
Helix 2
AA2
A
44 62Right-handed alpha
Helix 3
AA3
A
64 90Right-handed alpha
Helix 4
AA4
A
109 158Right-handed alpha
Helix 5
AA5
A
161 166Right-handed alpha
Helix 6
AA6
A
167 186Right-handed alpha
Helix 7
AA7
A
187 211Right-handed alpha
Helix 8
AA8
A
211 221Right-handed alpha
Helix 9
AA9
A
221 238Right-handed alpha
Helix 10
AB1
A
247 260Right-handed alpha
Helix 11
AB2
A
260 268Right-handed alpha
Helix 12
AB3
A
269 324Right-handed alpha
Helix 13
AB4
A
327 345Right-handed alpha
Helix 14
AB5
A
348 370Right-handed alpha
Helix 15
AB6
A
401 405Right-handed 310
Helix 16
AB7
A
434 441Right-handed alpha
Helix 17
AB8
A
462 469Right-handed alpha
Helix 18
AB9
A
483 492Right-handed alpha
Helix 19
AC1
A
496 507Right-handed alpha
Helix 20
AC2
A
511 516Right-handed alpha
Helix 21
AC3
A
518 522Right-handed 310
Helix 22
AC4
A
532 547Right-handed alpha
Helix 23
AC5
A
563 577Right-handed alpha
Helix 24
AC6
A
590 594Right-handed 310
Helix 25
AC7
A
611 619Right-handed alpha
Helix 26
AC8
A
620 630Right-handed alpha
Helix 27
AC9
A
696 704Right-handed alpha
Helix 28
AD1
A
707 723Right-handed alpha
Helix 29
AD2
A
724 741Right-handed alpha
Helix 30
AD3
A
744 799Right-handed alpha
Helix 31
AD4
A
800 806Right-handed alpha
Helix 32
AD5
A
810 825Right-handed alpha
Helix 33
AD6
A
826 828Right-handed 310
Helix 34
AD7
A
829 854Right-handed alpha
Helix 35
AD8
A
855 862Right-handed alpha
Helix 36
AD9
A
864 880Right-handed alpha
Helix 37
AE1
A
890 902Right-handed alpha
Helix 38
AE2
A
903 910Right-handed alpha
Helix 39
AE3
A
913 966Right-handed alpha
Helix 40
AE4
A
970 982Right-handed alpha
Helix 41
AE5
A
982 992Right-handed alpha
Helix 42
AE6
A
997 1013Right-handed alpha
Helix 43
AE7
A
1074 1084Right-handed alpha
Helix 44
AE8
A
1105 1112Right-handed alpha
Helix 45
AE9
A
1126 1132Right-handed alpha
Helix 46
AF1
A
1141 1152Right-handed alpha
Helix 47
AF2
A
1178 1191Right-handed alpha
Helix 48
AF3
A
1209 1223Right-handed alpha
Helix 49
AF4
A
1232 1236Right-handed 310
Helix 50
AF5
A
1257 1263Right-handed alpha
Helix 51
AF6
A
1265 1270Right-handed alpha
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There are 5 sheets in PDB entry 9CTC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
392 398anti-parallel
Strand 3
A
448 453anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 473first strand
Strand 2
A
551 555parallel
Strand 3
A
582 585parallel
Strand 4
A
422 426parallel
Strand 5
A
597 600parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1056 1059first strand
Strand 2
A
1035 1041anti-parallel
Strand 3
A
1091 1096anti-parallel
Strand 4
A
1099 1100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1228 1229first strand
Strand 2
A
1066 1069parallel
Strand 3
A
1242 1247parallel
Strand 4
A
1250 1256anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1114 1116first strand
Strand 2
A
1197 1199parallel
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