Analysis of interatomic Contacts of Structural Units in PDB entry:
9CUF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CUF entry

There are 2 chains in PDB entry 9CUF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 32TYR 470
B
 SER 32TYR 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9CUF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 52Right-handed alpha
Helix 2
AA2
A
53 58Right-handed 310
Helix 3
AA3
A
69 76Right-handed alpha
Helix 4
AA4
A
79 83Right-handed 310
Helix 5
AA5
A
90 92Right-handed 310
Helix 6
AA6
A
93 98Right-handed alpha
Helix 7
AA7
A
116 123Right-handed 310
Helix 8
AA8
A
127 135Right-handed alpha
Helix 9
AA9
A
135 141Right-handed alpha
Helix 10
AB1
A
143 151Right-handed 310
Helix 11
AB2
A
156 159Right-handed 310
Helix 12
AB3
A
172 180Right-handed alpha
Helix 13
AB4
A
190 198Right-handed alpha
Helix 14
AB5
A
211 215Right-handed 310
Helix 15
AB6
A
227 238Right-handed alpha
Helix 16
AB7
A
259 266Right-handed alpha
Helix 17
AB8
A
268 272Right-handed 310
Helix 18
AB9
A
274 280Right-handed alpha
Helix 19
AC1
A
306 310Right-handed 310
Helix 20
AC2
A
316 353Right-handed alpha
Helix 21
AC3
A
360 378Right-handed alpha
Helix 22
AC4
A
382 387Right-handed alpha
Helix 23
AC5
A
387 416Right-handed alpha
Helix 24
AC6
A
429 435Right-handed alpha
Helix 25
AC7
A
441 452Right-handed alpha
Helix 26
AC8
A
458 467Right-handed alpha
Helix 27
AC9
B
46 55Right-handed alpha
Helix 28
AD1
B
56 58Right-handed 310
Helix 29
AD2
B
64 69Right-handed alpha
Helix 30
AD3
B
79 83Right-handed 310
Helix 31
AD4
B
90 92Right-handed 310
Helix 32
AD5
B
93 101Right-handed alpha
Helix 33
AD6
B
116 120Right-handed 310
Helix 34
AD7
B
127 133Right-handed alpha
Helix 35
AD8
B
136 141Right-handed alpha
Helix 36
AD9
B
147 151Right-handed 310
Helix 37
AE1
B
156 161Right-handed alpha
Helix 38
AE2
B
172 183Right-handed alpha
Helix 39
AE3
B
190 198Right-handed alpha
Helix 40
AE4
B
211 215Right-handed 310
Helix 41
AE5
B
227 238Right-handed alpha
Helix 42
AE6
B
258 264Right-handed alpha
Helix 43
AE7
B
268 272Right-handed 310
Helix 44
AE8
B
274 280Right-handed alpha
Helix 45
AE9
B
314 353Right-handed alpha
Helix 46
AF1
B
360 378Right-handed alpha
Helix 47
AF2
B
382 387Right-handed alpha
Helix 48
AF3
B
387 415Right-handed alpha
Helix 49
AF4
B
429 436Right-handed alpha
Helix 50
AF5
B
440 452Right-handed alpha
Helix 51
AF6
B
455 467Right-handed alpha
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There are 4 sheets in PDB entry 9CUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
165 168anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
218 219anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
251 252anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 244first strand
Strand 2
B
251 252anti-parallel
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