Analysis of interatomic Contacts of Structural Units in PDB entry:
9CUH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9CUH entry

There are 4 chains in PDB entry 9CUH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 28	GLN 637
B	SER 28	GLN 637
C	SER 28	GLN 637
D	SER 28	GLN 637

There are128 helices in PDB entry 9CUH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	47	Right-handed alpha
Helix 2	AA2	A	47	55	Right-handed alpha
Helix 3	AA3	A	57	66	Right-handed alpha
Helix 4	AA4	A	81	89	Right-handed alpha
Helix 5	AA5	A	91	102	Right-handed alpha
Helix 6	AA6	A	103	106	Right-handed 310
Helix 7	AA7	A	119	127	Right-handed alpha
Helix 8	AA8	A	129	139	Right-handed alpha
Helix 9	AA9	A	165	173	Right-handed alpha
Helix 10	AB1	A	175	185	Right-handed alpha
Helix 11	AB2	A	198	205	Right-handed alpha
Helix 12	AB3	A	208	219	Right-handed alpha
Helix 13	AB4	A	231	235	Right-handed 310
Helix 14	AB5	A	242	250	Right-handed alpha
Helix 15	AB6	A	253	261	Right-handed alpha
Helix 16	AB7	A	291	298	Right-handed alpha
Helix 17	AB8	A	302	310	Right-handed 310
Helix 18	AB9	A	313	324	Right-handed alpha
Helix 19	AC1	A	325	349	Right-handed alpha
Helix 20	AC2	A	372	377	Right-handed alpha
Helix 21	AC3	A	379	403	Right-handed alpha
Helix 22	AC4	A	424	445	Right-handed alpha
Helix 23	AC5	A	450	463	Right-handed alpha
Helix 24	AC6	A	464	470	Right-handed 310
Helix 25	AC7	A	477	487	Right-handed alpha
Helix 26	AC8	A	489	492	Right-handed 310
Helix 27	AC9	A	493	512	Right-handed alpha
Helix 28	AD1	A	525	538	Right-handed alpha
Helix 29	AD2	A	552	566	Right-handed alpha
Helix 30	AD3	A	568	588	Right-handed alpha
Helix 31	AD4	A	588	608	Right-handed alpha
Helix 32	AD5	A	609	613	Right-handed 310
Helix 33	AD6	B	29	47	Right-handed alpha
Helix 34	AD7	B	47	55	Right-handed alpha
Helix 35	AD8	B	57	66	Right-handed alpha
Helix 36	AD9	B	81	89	Right-handed alpha
Helix 37	AE1	B	91	102	Right-handed alpha
Helix 38	AE2	B	103	106	Right-handed 310
Helix 39	AE3	B	119	127	Right-handed alpha
Helix 40	AE4	B	129	139	Right-handed alpha
Helix 41	AE5	B	165	173	Right-handed alpha
Helix 42	AE6	B	175	185	Right-handed alpha
Helix 43	AE7	B	198	205	Right-handed alpha
Helix 44	AE8	B	208	219	Right-handed alpha
Helix 45	AE9	B	231	235	Right-handed 310
Helix 46	AF1	B	242	250	Right-handed alpha
Helix 47	AF2	B	253	261	Right-handed alpha
Helix 48	AF3	B	291	298	Right-handed alpha
Helix 49	AF4	B	302	310	Right-handed 310
Helix 50	AF5	B	313	324	Right-handed alpha
Helix 51	AF6	B	325	349	Right-handed alpha
Helix 52	AF7	B	372	377	Right-handed alpha
Helix 53	AF8	B	379	403	Right-handed alpha
Helix 54	AF9	B	424	445	Right-handed alpha
Helix 55	AG1	B	450	463	Right-handed alpha
Helix 56	AG2	B	464	470	Right-handed 310
Helix 57	AG3	B	477	487	Right-handed alpha
Helix 58	AG4	B	489	492	Right-handed 310
Helix 59	AG5	B	493	512	Right-handed alpha
Helix 60	AG6	B	525	538	Right-handed alpha
Helix 61	AG7	B	552	566	Right-handed alpha
Helix 62	AG8	B	568	588	Right-handed alpha
Helix 63	AG9	B	588	608	Right-handed alpha
Helix 64	AH1	B	609	613	Right-handed 310
Helix 65	AH2	C	29	47	Right-handed alpha
Helix 66	AH3	C	47	55	Right-handed alpha
Helix 67	AH4	C	57	66	Right-handed alpha
Helix 68	AH5	C	81	89	Right-handed alpha
Helix 69	AH6	C	91	102	Right-handed alpha
Helix 70	AH7	C	103	106	Right-handed 310
Helix 71	AH8	C	119	127	Right-handed alpha
Helix 72	AH9	C	129	139	Right-handed alpha
Helix 73	AI1	C	165	173	Right-handed alpha
Helix 74	AI2	C	175	185	Right-handed alpha
Helix 75	AI3	C	198	205	Right-handed alpha
Helix 76	AI4	C	208	219	Right-handed alpha
Helix 77	AI5	C	231	235	Right-handed 310
Helix 78	AI6	C	242	250	Right-handed alpha
Helix 79	AI7	C	253	261	Right-handed alpha
Helix 80	AI8	C	291	298	Right-handed alpha
Helix 81	AI9	C	302	310	Right-handed 310
Helix 82	AJ1	C	313	324	Right-handed alpha
Helix 83	AJ2	C	325	349	Right-handed alpha
Helix 84	AJ3	C	372	377	Right-handed alpha
Helix 85	AJ4	C	379	403	Right-handed alpha
Helix 86	AJ5	C	424	445	Right-handed alpha
Helix 87	AJ6	C	450	463	Right-handed alpha
Helix 88	AJ7	C	464	470	Right-handed 310
Helix 89	AJ8	C	477	487	Right-handed alpha
Helix 90	AJ9	C	489	492	Right-handed 310
Helix 91	AK1	C	493	512	Right-handed alpha
Helix 92	AK2	C	525	538	Right-handed alpha
Helix 93	AK3	C	552	566	Right-handed alpha
Helix 94	AK4	C	568	588	Right-handed alpha
Helix 95	AK5	C	588	608	Right-handed alpha
Helix 96	AK6	C	609	613	Right-handed 310
Helix 97	AK7	D	29	47	Right-handed alpha
Helix 98	AK8	D	47	55	Right-handed alpha
Helix 99	AK9	D	57	66	Right-handed alpha
Helix 100	AL1	D	81	89	Right-handed alpha
Helix 101	AL2	D	91	102	Right-handed alpha
Helix 102	AL3	D	103	106	Right-handed 310
Helix 103	AL4	D	119	127	Right-handed alpha
Helix 104	AL5	D	129	139	Right-handed alpha
Helix 105	AL6	D	165	173	Right-handed alpha
Helix 106	AL7	D	175	185	Right-handed alpha
Helix 107	AL8	D	198	205	Right-handed alpha
Helix 108	AL9	D	208	219	Right-handed alpha
Helix 109	AM1	D	231	235	Right-handed 310
Helix 110	AM2	D	242	250	Right-handed alpha
Helix 111	AM3	D	253	261	Right-handed alpha
Helix 112	AM4	D	291	298	Right-handed alpha
Helix 113	AM5	D	302	310	Right-handed 310
Helix 114	AM6	D	313	324	Right-handed alpha
Helix 115	AM7	D	325	349	Right-handed alpha
Helix 116	AM8	D	372	377	Right-handed alpha
Helix 117	AM9	D	379	403	Right-handed alpha
Helix 118	AN1	D	424	445	Right-handed alpha
Helix 119	AN2	D	450	463	Right-handed alpha
Helix 120	AN3	D	464	470	Right-handed 310
Helix 121	AN4	D	477	487	Right-handed alpha
Helix 122	AN5	D	489	492	Right-handed 310
Helix 123	AN6	D	493	512	Right-handed alpha
Helix 124	AN7	D	525	538	Right-handed alpha
Helix 125	AN8	D	552	566	Right-handed alpha
Helix 126	AN9	D	568	588	Right-handed alpha
Helix 127	AO1	D	588	608	Right-handed alpha
Helix 128	AO2	D	609	613	Right-handed 310

There are 8 sheets in PDB entry 9CUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	269	first strand
Strand 2	A	273	278	anti-parallel
Strand 3	A	629	636	anti-parallel
Strand 4	A	618	619	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	368	370	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	269	first strand
Strand 2	B	273	278	anti-parallel
Strand 3	B	629	636	anti-parallel
Strand 4	B	618	619	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	354	first strand
Strand 2	B	368	370	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	269	first strand
Strand 2	C	273	278	anti-parallel
Strand 3	C	629	636	anti-parallel
Strand 4	C	618	619	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	352	354	first strand
Strand 2	C	368	370	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	269	first strand
Strand 2	D	273	278	anti-parallel
Strand 3	D	629	636	anti-parallel
Strand 4	D	618	619	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	352	354	first strand
Strand 2	D	368	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9CUH

Analysis of interatomic Contacts of Structural Units in PDB entry:
9CUH