Analysis of interatomic Contacts of Structural Units in PDB entry:
9CWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CWM entry

There are 2 chains in PDB entry 9CWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 220GLU 4411
B
 PRO 220GLU 4411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 9CWM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
238 240Right-handed 310
Helix 2
AA2
A
652 656Right-handed 310
Helix 3
AA3
A
661 665Right-handed 310
Helix 4
AA4
A
666 670Right-handed 310
Helix 5
AA5
A
979 984Right-handed 310
Helix 6
AA6
A
1083 1085Right-handed 310
Helix 7
AA7
A
1095 1100Right-handed alpha
Helix 8
AA8
A
1163 1168Right-handed 310
Helix 9
AA9
A
1202 1206Right-handed 310
Helix 10
AB1
A
1213 1215Right-handed 310
Helix 11
AB2
A
1216 1221Right-handed alpha
Helix 12
AB3
A
1247 1249Right-handed 310
Helix 13
AB4
A
1259 1263Right-handed 310
Helix 14
AB5
A
1351 1357Right-handed alpha
Helix 15
AB6
A
1358 1360Right-handed 310
Helix 16
AB7
A
1392 1396Right-handed 310
Helix 17
AB8
A
1451 1455Right-handed 310
Helix 18
AB9
A
1693 1697Right-handed 310
Helix 19
AC1
A
1702 1707Right-handed 310
Helix 20
AC2
A
2020 2025Right-handed alpha
Helix 21
AC3
A
2344 2353Right-handed 310
Helix 22
AC4
A
2653 2656Right-handed 310
Helix 23
AC5
A
2657 2662Right-handed alpha
Helix 24
AC6
A
2727 2732Right-handed 310
Helix 25
AC7
A
2733 2737Right-handed 310
Helix 26
AC8
A
3019 3023Right-handed 310
Helix 27
AC9
A
3044 3048Right-handed 310
Helix 28
AD1
A
3103 3108Right-handed alpha
Helix 29
AD2
A
3154 3159Right-handed alpha
Helix 30
AD3
A
3160 3163Right-handed 310
Helix 31
AD4
A
3458 3462Right-handed 310
Helix 32
AD5
A
3471 3476Right-handed alpha
Helix 33
AD6
A
3529 3531Right-handed 310
Helix 34
AD7
A
3567 3571Right-handed 310
Helix 35
AD8
A
3581 3584Right-handed 310
Helix 36
AD9
A
3585 3590Right-handed alpha
Helix 37
AE1
A
3610 3612Right-handed 310
Helix 38
AE2
A
3622 3625Right-handed 310
Helix 39
AE3
A
3626 3632Right-handed alpha
Helix 40
AE4
A
3651 3653Right-handed 310
Helix 41
AE5
A
3662 3666Right-handed 310
Helix 42
AE6
A
3667 3672Right-handed alpha
Helix 43
AE7
A
3694 3698Right-handed 310
Helix 44
AE8
A
3708 3713Right-handed alpha
Helix 45
AE9
A
3775 3777Right-handed 310
Helix 46
AF1
A
3814 3816Right-handed 310
Helix 47
AF2
A
3826 3831Right-handed alpha
Helix 48
AF3
A
4009 4013Right-handed 310
Helix 49
AF4
B
238 240Right-handed 310
Helix 50
AF5
B
652 656Right-handed 310
Helix 51
AF6
B
661 665Right-handed 310
Helix 52
AF7
B
666 670Right-handed 310
Helix 53
AF8
B
979 984Right-handed 310
Helix 54
AF9
B
1081 1085Right-handed 310
Helix 55
AG1
B
1095 1100Right-handed alpha
Helix 56
AG2
B
1137 1141Right-handed 310
Helix 57
AG3
B
1163 1168Right-handed 310
Helix 58
AG4
B
1202 1206Right-handed 310
Helix 59
AG5
B
1213 1215Right-handed 310
Helix 60
AG6
B
1216 1221Right-handed alpha
Helix 61
AG7
B
1247 1249Right-handed 310
Helix 62
AG8
B
1259 1263Right-handed 310
Helix 63
AG9
B
1351 1357Right-handed alpha
Helix 64
AH1
B
1358 1360Right-handed 310
Helix 65
AH2
B
1392 1396Right-handed 310
Helix 66
AH3
B
1451 1455Right-handed 310
Helix 67
AH4
B
1693 1697Right-handed 310
Helix 68
AH5
B
1702 1707Right-handed 310
Helix 69
AH6
B
2020 2025Right-handed alpha
Helix 70
AH7
B
2344 2353Right-handed 310
Helix 71
AH8
B
2653 2656Right-handed 310
Helix 72
AH9
B
2657 2662Right-handed alpha
Helix 73
AI1
B
2727 2732Right-handed 310
Helix 74
AI2
B
2767 2771Right-handed 310
Helix 75
AI3
B
3019 3023Right-handed 310
Helix 76
AI4
B
3044 3048Right-handed 310
Helix 77
AI5
B
3154 3159Right-handed alpha
Helix 78
AI6
B
3160 3163Right-handed 310
Helix 79
AI7
B
3458 3462Right-handed 310
Helix 80
AI8
B
3471 3476Right-handed alpha
Helix 81
AI9
B
3529 3531Right-handed 310
Helix 82
AJ1
B
3541 3545Right-handed 310
Helix 83
AJ2
B
3567 3571Right-handed 310
Helix 84
AJ3
B
3581 3584Right-handed 310
Helix 85
AJ4
B
3585 3590Right-handed alpha
Helix 86
AJ5
B
3610 3612Right-handed 310
Helix 87
AJ6
B
3622 3625Right-handed 310
Helix 88
AJ7
B
3626 3632Right-handed alpha
Helix 89
AJ8
B
3651 3653Right-handed 310
Helix 90
AJ9
B
3662 3666Right-handed 310
Helix 91
AK1
B
3667 3672Right-handed alpha
Helix 92
AK2
B
3694 3698Right-handed 310
Helix 93
AK3
B
3708 3713Right-handed alpha
Helix 94
AK4
B
3775 3777Right-handed 310
Helix 95
AK5
B
3826 3831Right-handed alpha
Helix 96
AK6
B
3856 3860Right-handed 310
Helix 97
AK7
B
4009 4013Right-handed 310
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