Analysis of interatomic Contacts of Structural Units in PDB entry:
9CWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CWO entry

There are 5 chains in PDB entry 9CWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 10VAL 1451
F
 MET 479GLY 582
C
 PRO 480GLY 582
G
 TYR 477ILE 578
E
 PRO 480ASN 708
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 9CWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 33Right-handed alpha
Helix 2
AA2
A
43 54Right-handed alpha
Helix 3
AA3
A
60 77Right-handed alpha
Helix 4
AA4
A
91 96Right-handed alpha
Helix 5
AA5
A
105 137Right-handed alpha
Helix 6
AA6
A
140 156Right-handed alpha
Helix 7
AA7
A
156 163Right-handed alpha
Helix 8
AA8
A
166 189Right-handed alpha
Helix 9
AA9
A
231 255Right-handed alpha
Helix 10
AB1
A
256 259Right-handed 310
Helix 11
AB2
A
260 273Right-handed alpha
Helix 12
AB3
A
275 280Right-handed alpha
Helix 13
AB4
A
282 289Right-handed alpha
Helix 14
AB5
A
289 300Right-handed alpha
Helix 15
AB6
A
309 325Right-handed alpha
Helix 16
AB7
A
330 346Right-handed alpha
Helix 17
AB8
A
349 355Right-handed alpha
Helix 18
AB9
A
356 358Right-handed 310
Helix 19
AC1
A
369 382Right-handed alpha
Helix 20
AC2
A
389 411Right-handed alpha
Helix 21
AC3
A
425 435Right-handed alpha
Helix 22
AC4
A
439 445Right-handed alpha
Helix 23
AC5
A
446 451Right-handed 310
Helix 24
AC6
A
479 483Right-handed 310
Helix 25
AC7
A
488 492Right-handed 310
Helix 26
AC8
A
504 511Right-handed alpha
Helix 27
AC9
A
516 526Right-handed alpha
Helix 28
AD1
A
527 532Right-handed alpha
Helix 29
AD2
A
557 573Right-handed alpha
Helix 30
AD3
A
575 580Right-handed alpha
Helix 31
AD4
A
725 730Right-handed alpha
Helix 32
AD5
A
731 747Right-handed alpha
Helix 33
AD6
A
754 760Right-handed alpha
Helix 34
AD7
A
802 821Right-handed alpha
Helix 35
AD8
A
847 874Right-handed alpha
Helix 36
AD9
A
904 910Right-handed alpha
Helix 37
AE1
A
922 940Right-handed alpha
Helix 38
AE2
A
943 964Right-handed alpha
Helix 39
AE3
A
972 982Right-handed alpha
Helix 40
AE4
A
982 992Right-handed alpha
Helix 41
AE5
A
993 997Right-handed 310
Helix 42
AE6
A
1014 1029Right-handed alpha
Helix 43
AE7
A
1033 1041Right-handed alpha
Helix 44
AE8
A
1049 1056Right-handed alpha
Helix 45
AE9
A
1067 1083Right-handed alpha
Helix 46
AF1
A
1096 1110Right-handed alpha
Helix 47
AF2
A
1115 1124Right-handed alpha
Helix 48
AF3
A
1126 1138Right-handed alpha
Helix 49
AF4
A
1156 1179Right-handed alpha
Helix 50
AF5
A
1191 1204Right-handed alpha
Helix 51
AF6
A
1204 1209Right-handed alpha
Helix 52
AF7
A
1220 1224Right-handed alpha
Helix 53
AF8
A
1291 1308Right-handed alpha
Helix 54
AF9
A
1311 1323Right-handed alpha
Helix 55
AG1
A
1329 1337Right-handed alpha
Helix 56
AG2
A
1366 1370Right-handed 310
Helix 57
AG3
A
1391 1407Right-handed alpha
Helix 58
AG4
F
480 485Right-handed alpha
Helix 59
AG5
F
492 497Right-handed alpha
Helix 60
AG6
F
498 501Right-handed 310
Helix 61
AG7
F
510 541Right-handed alpha
Helix 62
AG8
F
542 573Right-handed alpha
Helix 63
AG9
C
481 485Right-handed alpha
Helix 64
AH1
C
489 502Right-handed alpha
Helix 65
AH2
C
507 533Right-handed alpha
Helix 66
AH3
C
533 543Right-handed alpha
Helix 67
AH4
C
544 578Right-handed alpha
Helix 68
AH5
G
484 488Right-handed 310
Helix 69
AH6
G
489 504Right-handed alpha
Helix 70
AH7
G
511 539Right-handed alpha
Helix 71
AH8
G
542 574Right-handed alpha
Helix 72
AH9
E
489 503Right-handed alpha
Helix 73
AI1
E
507 543Right-handed alpha
Helix 74
AI2
E
545 574Right-handed alpha
Helix 75
AI3
E
605 609Right-handed 310
Helix 76
AI4
E
657 672Right-handed alpha
Helix 77
AI5
E
674 688Right-handed alpha
Helix 78
AI6
E
690 707Right-handed alpha
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There are 8 sheets in PDB entry 9CWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
224 230parallel
Strand 3
A
215 221anti-parallel
Strand 4
A
206 210anti-parallel
Strand 5
A
199 202anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 388first strand
Strand 2
F
575 578anti-parallel
Strand 3
E
594 599parallel
Strand 4
E
575 577anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
454 455anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
554 555first strand
Strand 2
A
538 539anti-parallel
Strand 3
A
764 766parallel
Strand 4
A
790 791anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
715 716first strand
Strand 2
A
839 840anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
718 720first strand
Strand 2
A
883 885anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
896 897first strand
Strand 2
A
900 901anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1225 1229first strand
Strand 2
A
1420 1424anti-parallel
Strand 3
A
1246 1250anti-parallel
Strand 4
A
1371 1373anti-parallel
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