Analysis of interatomic Contacts of Structural Units in PDB entry:
9CWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CWV entry

There are 18 chains in PDB entry 9CWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 12ALA 242
C
HIS 12ALA 242
B
HIS 12ALA 242
D
HIS 12ALA 242
E
HIS 12ALA 242
F
HIS 12ALA 242
G
HIS 12ALA 242
H
HIS 12ALA 242
I
HIS 12ALA 242
J
HIS 12ALA 242
K
HIS 12ALA 242
L
HIS 12ALA 242
M
HIS 12ALA 242
N
HIS 12ALA 242
O
HIS 12ALA 242
P
HIS 12ALA 242
Q
HIS 12ALA 242
R
HIS 12ALA 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are234 helices in PDB entry 9CWV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
16 31Right-handed alpha
Helix 2
AA2
A
35 44Right-handed alpha
Helix 3
AA3
A
48 58Right-handed alpha
Helix 4
AA4
A
62 84Right-handed alpha
Helix 5
AA5
A
100 105Right-handed alpha
Helix 6
AA6
A
110 120Right-handed alpha
Helix 7
AA7
A
125 145Right-handed alpha
Helix 8
AA8
A
149 153Right-handed 310
Helix 9
AA9
A
160 175Right-handed alpha
Helix 10
AB1
A
178 190Right-handed alpha
Helix 11
AB2
A
195 206Right-handed alpha
Helix 12
AB3
A
210 218Right-handed alpha
Helix 13
AB4
A
223 242Right-handed alpha
Helix 14
AB5
C
16 31Right-handed alpha
Helix 15
AB6
C
35 44Right-handed alpha
Helix 16
AB7
C
48 58Right-handed alpha
Helix 17
AB8
C
62 84Right-handed alpha
Helix 18
AB9
C
100 105Right-handed alpha
Helix 19
AC1
C
110 119Right-handed alpha
Helix 20
AC2
C
125 145Right-handed alpha
Helix 21
AC3
C
149 153Right-handed 310
Helix 22
AC4
C
160 174Right-handed alpha
Helix 23
AC5
C
178 193Right-handed alpha
Helix 24
AC6
C
195 205Right-handed alpha
Helix 25
AC7
C
210 219Right-handed alpha
Helix 26
AC8
C
223 242Right-handed alpha
Helix 27
AC9
B
16 31Right-handed alpha
Helix 28
AD1
B
35 44Right-handed alpha
Helix 29
AD2
B
48 58Right-handed alpha
Helix 30
AD3
B
62 84Right-handed alpha
Helix 31
AD4
B
100 105Right-handed alpha
Helix 32
AD5
B
110 120Right-handed alpha
Helix 33
AD6
B
125 145Right-handed alpha
Helix 34
AD7
B
149 153Right-handed 310
Helix 35
AD8
B
160 174Right-handed alpha
Helix 36
AD9
B
178 190Right-handed alpha
Helix 37
AE1
B
195 205Right-handed alpha
Helix 38
AE2
B
210 218Right-handed alpha
Helix 39
AE3
B
223 242Right-handed alpha
Helix 40
AE4
D
16 31Right-handed alpha
Helix 41
AE5
D
35 44Right-handed alpha
Helix 42
AE6
D
48 58Right-handed alpha
Helix 43
AE7
D
62 84Right-handed alpha
Helix 44
AE8
D
100 105Right-handed alpha
Helix 45
AE9
D
110 120Right-handed alpha
Helix 46
AF1
D
125 145Right-handed alpha
Helix 47
AF2
D
149 153Right-handed 310
Helix 48
AF3
D
160 174Right-handed alpha
Helix 49
AF4
D
178 190Right-handed alpha
Helix 50
AF5
D
195 206Right-handed alpha
Helix 51
AF6
D
210 218Right-handed alpha
Helix 52
AF7
D
223 242Right-handed alpha
Helix 53
AF8
E
16 31Right-handed alpha
Helix 54
AF9
E
35 44Right-handed alpha
Helix 55
AG1
E
48 58Right-handed alpha
Helix 56
AG2
E
62 84Right-handed alpha
Helix 57
AG3
E
100 105Right-handed alpha
Helix 58
AG4
E
110 119Right-handed alpha
Helix 59
AG5
E
125 145Right-handed alpha
Helix 60
AG6
E
149 153Right-handed 310
Helix 61
AG7
E
160 174Right-handed alpha
Helix 62
AG8
E
178 193Right-handed alpha
Helix 63
AG9
E
195 205Right-handed alpha
Helix 64
AH1
E
210 219Right-handed alpha
Helix 65
AH2
E
223 242Right-handed alpha
Helix 66
AH3
F
16 31Right-handed alpha
Helix 67
AH4
F
35 44Right-handed alpha
Helix 68
AH5
F
48 58Right-handed alpha
Helix 69
AH6
F
62 84Right-handed alpha
Helix 70
AH7
F
100 105Right-handed alpha
Helix 71
AH8
F
110 120Right-handed alpha
Helix 72
AH9
F
125 145Right-handed alpha
Helix 73
AI1
F
149 153Right-handed 310
Helix 74
AI2
F
160 174Right-handed alpha
Helix 75
AI3
F
178 190Right-handed alpha
Helix 76
AI4
F
195 205Right-handed alpha
Helix 77
AI5
F
210 218Right-handed alpha
Helix 78
AI6
F
223 242Right-handed alpha
Helix 79
AI7
G
16 31Right-handed alpha
Helix 80
AI8
G
35 44Right-handed alpha
Helix 81
AI9
G
48 58Right-handed alpha
Helix 82
AJ1
G
62 84Right-handed alpha
Helix 83
AJ2
G
100 105Right-handed alpha
Helix 84
AJ3
G
110 120Right-handed alpha
Helix 85
AJ4
G
125 145Right-handed alpha
Helix 86
AJ5
G
149 153Right-handed 310
Helix 87
AJ6
G
160 175Right-handed alpha
Helix 88
AJ7
G
178 190Right-handed alpha
Helix 89
AJ8
G
195 206Right-handed alpha
Helix 90
AJ9
G
210 218Right-handed alpha
Helix 91
AK1
G
223 242Right-handed alpha
Helix 92
AK2
H
16 31Right-handed alpha
Helix 93
AK3
H
35 44Right-handed alpha
Helix 94
AK4
H
48 59Right-handed alpha
Helix 95
AK5
H
62 84Right-handed alpha
Helix 96
AK6
H
100 105Right-handed alpha
Helix 97
AK7
H
110 119Right-handed alpha
Helix 98
AK8
H
125 145Right-handed alpha
Helix 99
AK9
H
149 153Right-handed 310
Helix 100
AL1
H
160 174Right-handed alpha
Helix 101
AL2
H
178 193Right-handed alpha
Helix 102
AL3
H
195 205Right-handed alpha
Helix 103
AL4
H
210 219Right-handed alpha
Helix 104
AL5
H
223 242Right-handed alpha
Helix 105
AL6
I
16 31Right-handed alpha
Helix 106
AL7
I
35 44Right-handed alpha
Helix 107
AL8
I
48 58Right-handed alpha
Helix 108
AL9
I
62 84Right-handed alpha
Helix 109
AM1
I
100 105Right-handed alpha
Helix 110
AM2
I
110 120Right-handed alpha
Helix 111
AM3
I
125 145Right-handed alpha
Helix 112
AM4
I
149 153Right-handed 310
Helix 113
AM5
I
160 174Right-handed alpha
Helix 114
AM6
I
178 190Right-handed alpha
Helix 115
AM7
I
195 205Right-handed alpha
Helix 116
AM8
I
210 218Right-handed alpha
Helix 117
AM9
I
223 242Right-handed alpha
Helix 118
AN1
J
16 31Right-handed alpha
Helix 119
AN2
J
35 44Right-handed alpha
Helix 120
AN3
J
48 58Right-handed alpha
Helix 121
AN4
J
62 84Right-handed alpha
Helix 122
AN5
J
100 105Right-handed alpha
Helix 123
AN6
J
110 120Right-handed alpha
Helix 124
AN7
J
125 145Right-handed alpha
Helix 125
AN8
J
149 153Right-handed 310
Helix 126
AN9
J
160 175Right-handed alpha
Helix 127
AO1
J
178 190Right-handed alpha
Helix 128
AO2
J
195 206Right-handed alpha
Helix 129
AO3
J
210 218Right-handed alpha
Helix 130
AO4
J
223 242Right-handed alpha
Helix 131
AO5
K
16 31Right-handed alpha
Helix 132
AO6
K
35 44Right-handed alpha
Helix 133
AO7
K
48 59Right-handed alpha
Helix 134
AO8
K
62 84Right-handed alpha
Helix 135
AO9
K
100 106Right-handed alpha
Helix 136
AP1
K
110 119Right-handed alpha
Helix 137
AP2
K
125 145Right-handed alpha
Helix 138
AP3
K
149 153Right-handed 310
Helix 139
AP4
K
160 174Right-handed alpha
Helix 140
AP5
K
178 193Right-handed alpha
Helix 141
AP6
K
195 205Right-handed alpha
Helix 142
AP7
K
210 219Right-handed alpha
Helix 143
AP8
K
223 242Right-handed alpha
Helix 144
AP9
L
16 31Right-handed alpha
Helix 145
AQ1
L
35 44Right-handed alpha
Helix 146
AQ2
L
48 58Right-handed alpha
Helix 147
AQ3
L
62 84Right-handed alpha
Helix 148
AQ4
L
100 105Right-handed alpha
Helix 149
AQ5
L
110 120Right-handed alpha
Helix 150
AQ6
L
125 145Right-handed alpha
Helix 151
AQ7
L
149 153Right-handed 310
Helix 152
AQ8
L
160 175Right-handed alpha
Helix 153
AQ9
L
178 190Right-handed alpha
Helix 154
AR1
L
195 205Right-handed alpha
Helix 155
AR2
L
210 218Right-handed alpha
Helix 156
AR3
L
223 242Right-handed alpha
Helix 157
AR4
M
16 31Right-handed alpha
Helix 158
AR5
M
35 44Right-handed alpha
Helix 159
AR6
M
48 59Right-handed alpha
Helix 160
AR7
M
62 84Right-handed alpha
Helix 161
AR8
M
100 105Right-handed alpha
Helix 162
AR9
M
110 120Right-handed alpha
Helix 163
AS1
M
125 145Right-handed alpha
Helix 164
AS2
M
149 153Right-handed 310
Helix 165
AS3
M
160 174Right-handed alpha
Helix 166
AS4
M
178 190Right-handed alpha
Helix 167
AS5
M
195 206Right-handed alpha
Helix 168
AS6
M
210 218Right-handed alpha
Helix 169
AS7
M
223 242Right-handed alpha
Helix 170
AS8
N
16 31Right-handed alpha
Helix 171
AS9
N
35 44Right-handed alpha
Helix 172
AT1
N
48 59Right-handed alpha
Helix 173
AT2
N
62 84Right-handed alpha
Helix 174
AT3
N
100 106Right-handed alpha
Helix 175
AT4
N
110 119Right-handed alpha
Helix 176
AT5
N
125 145Right-handed alpha
Helix 177
AT6
N
149 153Right-handed 310
Helix 178
AT7
N
160 174Right-handed alpha
Helix 179
AT8
N
178 193Right-handed alpha
Helix 180
AT9
N
195 205Right-handed alpha
Helix 181
AU1
N
210 219Right-handed alpha
Helix 182
AU2
N
223 242Right-handed alpha
Helix 183
AU3
O
16 31Right-handed alpha
Helix 184
AU4
O
35 44Right-handed alpha
Helix 185
AU5
O
48 58Right-handed alpha
Helix 186
AU6
O
62 84Right-handed alpha
Helix 187
AU7
O
100 105Right-handed alpha
Helix 188
AU8
O
110 120Right-handed alpha
Helix 189
AU9
O
125 145Right-handed alpha
Helix 190
AV1
O
149 153Right-handed 310
Helix 191
AV2
O
160 174Right-handed alpha
Helix 192
AV3
O
178 190Right-handed alpha
Helix 193
AV4
O
195 205Right-handed alpha
Helix 194
AV5
O
210 218Right-handed alpha
Helix 195
AV6
O
223 242Right-handed alpha
Helix 196
AV7
P
16 31Right-handed alpha
Helix 197
AV8
P
35 44Right-handed alpha
Helix 198
AV9
P
48 58Right-handed alpha
Helix 199
AW1
P
62 84Right-handed alpha
Helix 200
AW2
P
100 105Right-handed alpha
Helix 201
AW3
P
110 120Right-handed alpha
Helix 202
AW4
P
125 145Right-handed alpha
Helix 203
AW5
P
149 153Right-handed 310
Helix 204
AW6
P
160 175Right-handed alpha
Helix 205
AW7
P
178 190Right-handed alpha
Helix 206
AW8
P
195 206Right-handed alpha
Helix 207
AW9
P
210 218Right-handed alpha
Helix 208
AX1
P
223 242Right-handed alpha
Helix 209
AX2
Q
16 31Right-handed alpha
Helix 210
AX3
Q
35 44Right-handed alpha
Helix 211
AX4
Q
48 58Right-handed alpha
Helix 212
AX5
Q
62 84Right-handed alpha
Helix 213
AX6
Q
100 105Right-handed alpha
Helix 214
AX7
Q
110 119Right-handed alpha
Helix 215
AX8
Q
125 145Right-handed alpha
Helix 216
AX9
Q
149 153Right-handed 310
Helix 217
AY1
Q
160 174Right-handed alpha
Helix 218
AY2
Q
178 193Right-handed alpha
Helix 219
AY3
Q
195 205Right-handed alpha
Helix 220
AY4
Q
210 219Right-handed alpha
Helix 221
AY5
Q
223 242Right-handed alpha
Helix 222
AY6
R
16 31Right-handed alpha
Helix 223
AY7
R
35 44Right-handed alpha
Helix 224
AY8
R
48 58Right-handed alpha
Helix 225
AY9
R
62 84Right-handed alpha
Helix 226
AZ1
R
100 105Right-handed alpha
Helix 227
AZ2
R
110 120Right-handed alpha
Helix 228
AZ3
R
125 145Right-handed alpha
Helix 229
AZ4
R
149 153Right-handed 310
Helix 230
AZ5
R
160 174Right-handed alpha
Helix 231
AZ6
R
178 190Right-handed alpha
Helix 232
AZ7
R
195 205Right-handed alpha
Helix 233
AZ8
R
210 218Right-handed alpha
Helix 234
AZ9
R
223 242Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9CWV

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il