Analysis of interatomic Contacts of Structural Units in PDB entry:
9CX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CX8 entry

There are 2 chains in PDB entry 9CX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 290
B
 ALA 0LYS 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9CX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 10Right-handed alpha
Helix 2
AA2
A
47 66Right-handed alpha
Helix 3
AA3
A
99 117Right-handed alpha
Helix 4
AA4
A
144 153Right-handed alpha
Helix 5
AA5
A
153 166Right-handed alpha
Helix 6
AA6
A
167 181Right-handed alpha
Helix 7
AA7
A
182 185Right-handed 310
Helix 8
AA8
A
200 202Right-handed 310
Helix 9
AA9
A
222 234Right-handed alpha
Helix 10
AB1
A
237 248Right-handed alpha
Helix 11
AB2
A
253 274Right-handed alpha
Helix 12
AB3
A
277 290Right-handed alpha
Helix 13
AB4
B
1 10Right-handed alpha
Helix 14
AB5
B
47 65Right-handed alpha
Helix 15
AB6
B
99 117Right-handed alpha
Helix 16
AB7
B
144 153Right-handed alpha
Helix 17
AB8
B
153 166Right-handed alpha
Helix 18
AB9
B
167 181Right-handed alpha
Helix 19
AC1
B
182 186Right-handed 310
Helix 20
AC2
B
200 202Right-handed 310
Helix 21
AC3
B
222 234Right-handed alpha
Helix 22
AC4
B
237 248Right-handed alpha
Helix 23
AC5
B
253 274Right-handed alpha
Helix 24
AC6
B
277 290Right-handed alpha
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There are 8 sheets in PDB entry 9CX8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 17first strand
Strand 2
B
27 33anti-parallel
Strand 3
B
36 43anti-parallel
Strand 4
B
84 89anti-parallel
Strand 5
B
73 78anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 78first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
38 43anti-parallel
Strand 4
A
29 33anti-parallel
Strand 5
B
14 16anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
135 136anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
219 221anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 206first strand
Strand 2
A
211 213anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
135 136anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 195first strand
Strand 2
B
219 221anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 206first strand
Strand 2
B
211 213anti-parallel
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