Analysis of interatomic Contacts of Structural Units in PDB entry:
9CXI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CXI entry

There are 4 chains in PDB entry 9CXI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 53VAL 825
B
 SER 51MET 823
C
 LYS 25ILE 87
D
 GLY 26ILE 87
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 9CXI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 70Right-handed alpha
Helix 2
AA2
A
75 92Right-handed alpha
Helix 3
AA3
A
122 127Right-handed alpha
Helix 4
AA4
A
140 150Right-handed alpha
Helix 5
AA5
A
157 161Right-handed 310
Helix 6
AA6
A
166 173Right-handed alpha
Helix 7
AA7
A
206 251Right-handed alpha
Helix 8
AA8
A
256 268Right-handed alpha
Helix 9
AA9
A
269 271Right-handed 310
Helix 10
AB1
A
289 298Right-handed alpha
Helix 11
AB2
A
341 346Right-handed alpha
Helix 12
AB3
A
347 356Right-handed alpha
Helix 13
AB4
A
364 367Right-handed 310
Helix 14
AB5
A
415 432Right-handed alpha
Helix 15
AB6
A
432 461Right-handed alpha
Helix 16
AB7
A
463 471Right-handed alpha
Helix 17
AB8
A
472 478Right-handed alpha
Helix 18
AB9
A
486 498Right-handed alpha
Helix 19
AC1
A
517 532Right-handed alpha
Helix 20
AC2
A
533 538Right-handed alpha
Helix 21
AC3
A
541 556Right-handed alpha
Helix 22
AC4
A
563 580Right-handed alpha
Helix 23
AC5
A
582 587Right-handed 310
Helix 24
AC6
A
588 601Right-handed alpha
Helix 25
AC7
A
610 618Right-handed alpha
Helix 26
AC8
A
619 625Right-handed alpha
Helix 27
AC9
A
628 644Right-handed alpha
Helix 28
AD1
A
654 671Right-handed alpha
Helix 29
AD2
A
673 693Right-handed alpha
Helix 30
AD3
A
696 707Right-handed alpha
Helix 31
AD4
A
707 724Right-handed alpha
Helix 32
AD5
A
725 729Right-handed 310
Helix 33
AD6
A
730 755Right-handed alpha
Helix 34
AD7
A
761 770Right-handed 310
Helix 35
AD8
A
771 783Right-handed alpha
Helix 36
AD9
A
783 795Right-handed alpha
Helix 37
AE1
A
798 823Right-handed alpha
Helix 38
AE2
B
52 68Right-handed alpha
Helix 39
AE3
B
69 71Right-handed 310
Helix 40
AE4
B
75 92Right-handed alpha
Helix 41
AE5
B
122 127Right-handed alpha
Helix 42
AE6
B
140 150Right-handed alpha
Helix 43
AE7
B
157 161Right-handed 310
Helix 44
AE8
B
166 173Right-handed alpha
Helix 45
AE9
B
206 251Right-handed alpha
Helix 46
AF1
B
256 273Right-handed alpha
Helix 47
AF2
B
289 298Right-handed alpha
Helix 48
AF3
B
341 346Right-handed alpha
Helix 49
AF4
B
347 356Right-handed alpha
Helix 50
AF5
B
364 367Right-handed 310
Helix 51
AF6
B
415 461Right-handed alpha
Helix 52
AF7
B
463 469Right-handed alpha
Helix 53
AF8
B
472 478Right-handed alpha
Helix 54
AF9
B
486 495Right-handed alpha
Helix 55
AG1
B
502 506Right-handed 310
Helix 56
AG2
B
517 532Right-handed alpha
Helix 57
AG3
B
541 556Right-handed alpha
Helix 58
AG4
B
563 580Right-handed alpha
Helix 59
AG5
B
582 587Right-handed 310
Helix 60
AG6
B
588 601Right-handed alpha
Helix 61
AG7
B
610 617Right-handed alpha
Helix 62
AG8
B
619 625Right-handed alpha
Helix 63
AG9
B
628 644Right-handed alpha
Helix 64
AH1
B
654 671Right-handed alpha
Helix 65
AH2
B
673 694Right-handed alpha
Helix 66
AH3
B
696 706Right-handed alpha
Helix 67
AH4
B
707 724Right-handed alpha
Helix 68
AH5
B
725 729Right-handed 310
Helix 69
AH6
B
730 757Right-handed alpha
Helix 70
AH7
B
765 770Right-handed 310
Helix 71
AH8
B
771 783Right-handed alpha
Helix 72
AH9
B
783 795Right-handed alpha
Helix 73
AI1
B
798 823Right-handed alpha
Helix 74
AI2
C
34 39Right-handed 310
Helix 75
AI3
C
76 84Right-handed alpha
Helix 76
AI4
D
76 85Right-handed alpha
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There are 4 sheets in PDB entry 9CXI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 137first strand
Strand 2
A
107 117anti-parallel
Strand 3
A
94 104anti-parallel
Strand 4
A
189 197anti-parallel
Strand 5
A
179 186anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 335first strand
Strand 2
A
317 324anti-parallel
Strand 3
A
276 282anti-parallel
Strand 4
A
399 405anti-parallel
Strand 5
A
386 393anti-parallel
Strand 6
A
359 362anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 137first strand
Strand 2
B
107 117anti-parallel
Strand 3
B
94 104anti-parallel
Strand 4
B
189 197anti-parallel
Strand 5
B
179 186anti-parallel
Strand 6
B
153 155anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 335first strand
Strand 2
B
317 324anti-parallel
Strand 3
B
276 282anti-parallel
Strand 4
B
399 405anti-parallel
Strand 5
B
386 393anti-parallel
Strand 6
B
359 362anti-parallel
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