Analysis of interatomic Contacts of Structural Units in PDB entry:
9CXX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9CXX entry

There are 2 chains in PDB entry 9CXX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 15ASN 314
B
 ILE 16ALA 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9CXX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 75Right-handed alpha
Helix 2
AA2
A
127 134Right-handed alpha
Helix 3
AA3
A
136 148Right-handed alpha
Helix 4
AA4
A
180 196Right-handed alpha
Helix 5
AA5
A
207 222Right-handed alpha
Helix 6
AA6
A
229 231Right-handed 310
Helix 7
AA7
A
232 239Right-handed alpha
Helix 8
AA8
A
239 253Right-handed alpha
Helix 9
AA9
A
264 277Right-handed alpha
Helix 10
AB1
B
61 75Right-handed alpha
Helix 11
AB2
B
127 134Right-handed alpha
Helix 12
AB3
B
136 148Right-handed alpha
Helix 13
AB4
B
173 177Right-handed 310
Helix 14
AB5
B
180 197Right-handed alpha
Helix 15
AB6
B
207 214Right-handed alpha
Helix 16
AB7
B
214 222Right-handed alpha
Helix 17
AB8
B
229 231Right-handed 310
Helix 18
AB9
B
232 239Right-handed alpha
Helix 19
AC1
B
239 253Right-handed alpha
Helix 20
AC2
B
264 278Right-handed alpha
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There are 6 sheets in PDB entry 9CXX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
37 43anti-parallel
Strand 3
A
16 26anti-parallel
Strand 4
A
98 111parallel
Strand 5
A
76 90anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
16 26anti-parallel
Strand 3
A
37 43anti-parallel
Strand 4
A
121 126anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
201 205parallel
Strand 3
A
257 261parallel
Strand 4
A
154 160parallel
Strand 5
A
291 297anti-parallel
Strand 6
A
300 307anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
17 26anti-parallel
Strand 4
B
99 111parallel
Strand 5
B
76 88anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
17 26anti-parallel
Strand 3
B
37 43anti-parallel
Strand 4
B
121 126anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 228first strand
Strand 2
B
201 205parallel
Strand 3
B
257 261parallel
Strand 4
B
154 160parallel
Strand 5
B
291 297anti-parallel
Strand 6
B
300 307anti-parallel
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