Analysis of interatomic Contacts of Structural Units in PDB entry:
9D14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9D14 entry

There is 1 chain in PDB entry 9D14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 20PRO 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9D14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 106Right-handed alpha
Helix 2
AA2
A
172 183Right-handed alpha
Helix 3
AA3
A
194 196Right-handed 310
Helix 4
AA4
A
197 208Right-handed alpha
Helix 5
AA5
A
224 227Right-handed 310
Helix 6
AA6
A
243 253Right-handed alpha
Helix 7
AA7
A
269 279Right-handed alpha
Helix 8
AA8
A
282 284Right-handed 310
Helix 9
AA9
A
305 312Right-handed alpha
Helix 10
AB1
A
312 317Right-handed alpha
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There are 5 sheets in PDB entry 9D14. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
44 45anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
27 31anti-parallel
Strand 3
A
125 137parallel
Strand 4
A
111 121anti-parallel
Strand 5
A
58 63anti-parallel
Strand 6
A
66 67anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
81 86anti-parallel
Strand 3
A
92 95anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 222first strand
Strand 2
A
186 191parallel
Strand 3
A
142 146parallel
Strand 4
A
262 267parallel
Strand 5
A
286 289parallel
Strand 6
A
295 297anti-parallel
Strand 7
A
302 304anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
213 214anti-parallel
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